Job Description P0AFM2 Confidence 69.95% Date Thu Jan 5 11:26:43 GMT 2012 Rank 111 Aligned Residues 122 % Identity 15% Template d1ryoa_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Transferrin Resolution 1.20

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.				50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure																							.	.	.
Query SS confidence																							.	.	.
Query Sequence		I	T	V	N	P	V	Q	S	T	I	T	E	E	T	F	Q	T	L	L	V	S	.	.	.	R	A	L	E	K	L	G	Y	T	V	N	K	P	S	E	V	D	Y	N	V	G	Y	T	S	L	A	S	G	D	A	T	F	T	A	V	N	W	T	P	L	H	D	N	M	Y	E	A	A	G	G	D	K	K	F	Y	R
Query Conservation																							.	.	.
Alig confidence																							.	.	.
Template Conservation
Template Sequence		K	T	V	R	W	C	A	V	S	E	H	E	A	T	K	C	Q	S	F	R	D	H	M	K	S	V	I	P	S	D	G	P	S	V	A	C	V	K	K	A	S	Y	L	D	C	I	R	A	I	A	A	N	E	A	D	A	V	T	L	D	A	G	L	V	Y	D	A	Y	L	A	P	N	N	L	K	P	V	V	A	E
Template Known Secondary structure																												S		T	T	S									S	S										T	T	S			B													S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	V	F	V	N	G	A	A	Q	G	Y	L	I	D	K	K	T	A	D	Q	Y	K	I	T	N	I	A	Q	L	K	D	P	K	I	A	K	L	F	D	T	N	G	D	G	K	A	D	L	T	G	C	N	P	G	W
Query Conservation
Alig confidence																										.														.	.	.	.	.	.	.	.	.	.
Template Conservation																										.														.	.	.	.	.	.	.	.	.	.
Template Sequence		F	Y	G	S	K	E	D	P	Q	T	F	Y	Y	A	V	A	V	V	K	K	D	S	G	F	.	Q	M	N	Q	L	R	G	K	K	S	C	H	T	.	.	.	.	.	.	.	.	.	.	G	L	G	R	S	A	G	W
Template Known Secondary structure						S	S	S			S										T	T				.		G	G	G		T	T						S	.	.	.	.	.	.	.	.	.	.		T	T		T	T	T	T
Template Predicted Secondary structure																										.														.	.	.	.	.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120											.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions