Job Description P0AFM2 Confidence 93.83% Date Thu Jan 5 11:26:43 GMT 2012 Rank 60 Aligned Residues 139 % Identity 18% Template d1pb7a_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.35

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		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.																	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	L	V	S	R	A	L	E	K	L	G	Y	T	V	N	K	P	S	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	Y	N	V	G	Y	T	S	L	A	S	G	D	A	T	F	T	A	V	N	W	T	P	L	H	D	N	M	Y	E	A	A	G	G	D	K	K	F	Y	R	E	G	V	F
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.	.
Template Sequence		D	L	L	I	K	L	A	R	T	M	N	F	T	Y	E	V	H	L	V	A	D	G	K	F	G	T	Q	E	R	V	N	N	S	N	K	K	E	W	N	G	M	M	G	E	L	L	S	G	Q	A	D	M	I	V	A	P	L	T	I	N	N	E	R	A	.	.	.	.	.	.	.	.	Q	Y	I	E	F	S	K	P
Template Known Secondary structure												T									T	T										T	T	S	S														T	S		S				S	S		B							.	.	.	.	.	.	.	.	T	T					S
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.									.	.	.	.	.	.	.	140
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	G	A	A	Q	G	Y	L	I	D	K	K	T	A	D	Q	Y	K	I	T	N	I	A	Q	L	K	D	P	K	I	A	K	L	F	D	T	N	G	D	G	K	A	D	L	T	G	C	N	P	G	W	G	C	E	G	A	I	N	H	Q	L	A	A	Y	E	L	T	N	T	V	T	H	N	Q	G	N	Y	A	A
Query Conservation
Alig confidence																.	.	.	.																.	.	.	.	.	.	.	.	.																																						.
Template Conservation																.	.	.	.																.	.	.	.	.	.	.	.	.																																						.
Template Sequence		F	K	Y	Q	G	L	T	I	L	V	K	K	G	T	.	.	.	.	R	I	T	G	I	N	D	P	R	L	R	N	P	S	D	.	.	.	.	.	.	.	.	.	K	F	I	Y	A	T	V	K	Q	S	S	V	D	I	Y	F	R	R	Q	V	E	L	S	T	M	Y	R	H	M	E	K	H	N	Y	E	S	A	.
Template Known Secondary structure		S											T	T		.	.	.	.				S	T	T						S		B	T	.	.	.	.	.	.	.	.	.	T	B					B	T	T	S								T		G	G	G								T	T	T		B	S	S		.
Template Predicted Secondary structure																.	.	.	.																.	.	.	.	.	.	.	.	.																																						.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.					.	.	.	.	.	160	.	.	.	.	.	.	.	.	.										170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	M	A	D	T	I	S	R	Y	K	E	G	K	P	V	F	Y	Y	T
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	A	E	A	I	Q	A	V	R	D	N	K	L	H	A	F	I	W
Template Known Secondary structure		.	.									T	T	S		S
Template Predicted Secondary structure		.	.
Template SS confidence
				207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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