Job Description P0AFM2 Confidence 61.20% Date Thu Jan 5 11:26:43 GMT 2012 Rank 124 Aligned Residues 100 % Identity 16% Template d1jnfa1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Transferrin Resolution 2.60

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		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.								.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure																																																																	.	.	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.	.	.
Query Sequence		Q	T	L	L	V	S	R	A	L	E	K	L	G	Y	T	V	N	K	P	S	E	V	D	Y	N	V	G	Y	T	S	L	A	S	G	D	A	T	F	T	A	V	N	W	T	P	L	H	D	N	M	Y	E	A	A	G	G	D	K	K	F	Y	R	E	.	.	.	.	.	.	.	G	V	F	V	N	G	A	A	Q	G
Query Conservation																																																																	.	.	.	.	.	.	.
Alig confidence																																												.	.	.	.																		.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.
Template Sequence		F	R	D	S	M	K	K	V	L	P	E	D	G	P	R	I	I	C	V	K	K	A	S	Y	L	D	C	I	K	A	I	A	A	H	E	A	D	A	V	T	L	D	.	.	.	.	A	G	L	V	H	E	A	G	L	T	P	N	N	L	K	P	V	V	A	E	F	Y	G	S	K	E	N	P	K	T	F	Y	Y	A
Template Known Secondary structure										S		T	T	S									S	S										T	T	S			B					.	.	.	.									S	T	T	T										B	S		S	S	S		B	S
Template Predicted Secondary structure																																												.	.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.					.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	L	I	D	K	K	T	A	D	Q	Y	K	I	T	N	I	A	Q	L	K	D	P	K	I	A	K	L	F	D	T	N	G	D	G	K	A	D	L	T	G	C	N	P	G	W
Query Conservation
Alig confidence										.	.	.			.														.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.			.														.	.	.	.	.	.	.	.	.	.
Template Sequence		V	A	L	V	K	K	G	S	.	.	.	N	F	.	Q	L	N	E	L	Q	G	K	K	S	C	H	T	.	.	.	.	.	.	.	.	.	.	G	L	G	R	S	A	G	W
Template Known Secondary structure							T	T		.	.	.			.		G	G	G		T	T						S	.	.	.	.	.	.	.	.	.	.		T	T		T	T	T	T
Template Predicted Secondary structure										.	.	.			.														.	.	.	.	.	.	.	.	.	.
Template SS confidence
		98	.	100	.	.	.	.	.				.	.		.	.	110	.	.	.	.	.	.	.	.	.	120											.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions