Job Description P0AFM2 Confidence 68.01% Date Thu Jan 5 11:26:43 GMT 2012 Rank 114 Aligned Residues 104 % Identity 11% Template d1ieja_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Transferrin Resolution 1.65

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		T	V	N	P	V	Q	S	T	I	T	E	E	T	F	Q	T	L	L	V	S	R	A	L	E	K	L	G	Y	T	V	N	K	P	S	E	V	D	Y	N	V	G	Y	T	S	L	A	S	G	D	A	T	F	T	A	V	N	W	T	P	L	H	D	N	M	Y	E	A	A	G	G	D	K	K	F	Y	R	E	G	.	.
Query Conservation																																																																																.	.
Alig confidence															.																																											.	.	.	.																			.	.
Template Conservation															.																																											.	.	.	.
Template Sequence		V	I	R	W	C	T	I	S	S	P	E	E	K	.	K	C	N	N	L	R	D	L	T	Q	Q	E	R	I	S	L	T	C	V	Q	K	A	T	Y	L	D	C	I	K	A	I	A	N	N	E	A	D	A	I	T	L	D	.	.	.	.	G	G	Q	V	F	E	A	G	L	A	P	Y	K	L	K	P	I	A	A	E
Template Known Secondary structure								S	S						.									T	T	T	S	S									S	S										T	T	S			B					.	.	.	.								T	S	T	T	T
Template Predicted Secondary structure															.																																											.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.		.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60					.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
				108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	V	F	V	N	G	A	A	Q	G	Y	L	I	D	K	K	T	A	D	Q	Y	K	I	T	N	I	A	Q	L	K	D	P	K
Query Conservation		.	.
Alig confidence		.	.																							.
Template Conservation																										.
Template Sequence		V	Y	E	H	T	E	G	S	T	T	S	Y	Y	A	V	A	V	V	K	K	G	T	E	F	.	T	V	N	D	L	Q	G	K	T
Template Known Secondary structure						S	S	S			S										T	T				.		G	G	G		T	T
Template Predicted Secondary structure																										.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions