Job Description P0AFM2 Confidence 63.25% Date Thu Jan 5 11:26:43 GMT 2012 Rank 120 Aligned Residues 113 % Identity 14% Template d1h76a1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Transferrin Resolution 2.15

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.			.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.
Query SS confidence																																		.	.
Query Sequence		T	V	N	P	V	Q	S	T	I	T	E	E	T	F	Q	T	L	L	V	S	R	A	L	E	K	L	G	Y	T	V	N	K	.	.	P	S	E	V	D	Y	N	V	G	Y	T	S	L	A	S	G	D	A	T	F	T	A	V	N	W	T	P	L	H	D	N	M	Y	E	A	A	G	G	D	K	K	F	Y	R	E	G
Query Conservation																																		.	.
Alig confidence																																		.	.																									.	.	.	.
Template Conservation																																																												.	.	.	.
Template Sequence		T	V	R	W	C	T	I	S	N	Q	E	A	N	K	C	S	S	F	R	E	N	M	S	K	A	V	K	N	G	P	L	V	S	C	V	K	K	S	S	Y	L	D	C	I	K	A	I	R	D	K	E	A	D	A	V	T	L	D	.	.	.	.	A	G	L	V	F	E	A	G	L	A	P	Y	N	L	K	P	V	V
Template Known Secondary structure									S																			S	S	S									S	S										T	T	S			B					.	.	.	.								T	S	T	T	T
Template Predicted Secondary structure																																																												.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.					.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		108	.	110	.	.	.	.	.									.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure										.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.
Query Sequence		V	F	V	N	G	A	A	Q	.	.	.	.	.	.	.	.	G	Y	L	I	D	K	K	T	A	D	Q	Y	K	I	T	N	I	A	Q	L	K	D	P	K	I	A	K	L	F	D	T	N	G	D	G	K	A	D	L	T	G	C	N	P	G	W
Query Conservation										.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.									.	.	.	.			.														.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.			.														.	.	.	.	.	.	.	.	.	.
Template Sequence		A	E	F	Y	G	Q	K	D	N	P	Q	T	H	Y	Y	A	V	A	V	V	K	K	G	S	.	.	.	.	N	F	.	Q	W	N	Q	L	Q	G	K	R	S	C	H	T	.	.	.	.	.	.	.	.	.	.	G	L	G	R	S	A	G	W
Template Known Secondary structure					B	S		T	T	S		B	S										T	T		.	.	.	.			.		G	G	G		T	T						S	.	.	.	.	.	.	.	.	.	.		T	T		T	T	T	T
Template Predicted Secondary structure																										.	.	.	.			.														.	.	.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.					.	.		.	.	.	110	.	.	.	.	.	.	.	.	.											120	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions