Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFM2
Confidence52.55%DateThu Jan 5 11:26:43 GMT 2012
Rank137Aligned Residues113
% Identity13%Templated1ce2a1
SCOP infoPeriplasmic binding protein-like II Periplasmic binding protein-like II Transferrin
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  TVNPVQSTITEETFQTLLVSRALEKLGYTVNKPSEVDYNVGYTSLASGDATFTAVNWTPLHDNMYEAAGGDKKFYRE. . .
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Template Sequence  NVRWCTISQPEWLKCHRWQWRMKKLGAPSITCVRRASVLECIRAITEKKADAVTLD. . . . GGMVFEAGRDPYKLRPVAAE
Template Known Secondary structure  SSSTT

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Query Sequence  . . . GVFVNGAAQ. . GYLIDKKTADQYKITNIAQLKDPKIAKLFDTNGDGKADLTGCNPGW
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Template Sequence  IYGTKESPQTHYYAVAVVKKGS. . . . NF. QLDQLQGRNSCHT. . . . . . . . . . GLGRSAGW
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GGG
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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