Job Description P0AFM2 Confidence 52.55% Date Thu Jan 5 11:26:43 GMT 2012 Rank 137 Aligned Residues 113 % Identity 13% Template d1ce2a1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Transferrin Resolution 2.50

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		T	V	N	P	V	Q	S	T	I	T	E	E	T	F	Q	T	L	L	V	S	R	A	L	E	K	L	G	Y	T	V	N	K	P	S	E	V	D	Y	N	V	G	Y	T	S	L	A	S	G	D	A	T	F	T	A	V	N	W	T	P	L	H	D	N	M	Y	E	A	A	G	G	D	K	K	F	Y	R	E	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence																																																										.	.	.	.																		.	.	.
Template Conservation																																																										.	.	.	.
Template Sequence		N	V	R	W	C	T	I	S	Q	P	E	W	L	K	C	H	R	W	Q	W	R	M	K	K	L	G	A	P	S	I	T	C	V	R	R	A	S	V	L	E	C	I	R	A	I	T	E	K	K	A	D	A	V	T	L	D	.	.	.	.	G	G	M	V	F	E	A	G	R	D	P	Y	K	L	R	P	V	A	A	E
Template Known Secondary structure		S						S	S																T	T			S								S	S										T	T	S			B					.	.	.	.									S	T	T	T
Template Predicted Secondary structure																																																										.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60					.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
					107	.	.	110	.	.	.	.	.			.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure		.	.	.										.	.
Query SS confidence		.	.	.										.	.
Query Sequence		.	.	.	G	V	F	V	N	G	A	A	Q	.	.	G	Y	L	I	D	K	K	T	A	D	Q	Y	K	I	T	N	I	A	Q	L	K	D	P	K	I	A	K	L	F	D	T	N	G	D	G	K	A	D	L	T	G	C	N	P	G	W
Query Conservation		.	.	.										.	.
Alig confidence		.	.	.										.	.									.	.	.	.			.														.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.			.														.	.	.	.	.	.	.	.	.	.
Template Sequence		I	Y	G	T	K	E	S	P	Q	T	H	Y	Y	A	V	A	V	V	K	K	G	S	.	.	.	.	N	F	.	Q	L	D	Q	L	Q	G	R	N	S	C	H	T	.	.	.	.	.	.	.	.	.	.	G	L	G	R	S	A	G	W
Template Known Secondary structure						S	S	S			S										T	T		.	.	.	.			.		G	G	G		T	T						S	.	.	.	.	.	.	.	.	.	.		T	T		T	T	T	T
Template Predicted Secondary structure																								.	.	.	.			.														.	.	.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.					.	.		.	.	.	.	.	110	.	.	.	.	.	.	.											.	.	120	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions