Job Description P0AFM2 Confidence 79.77% Date Thu Jan 5 11:26:43 GMT 2012 Rank 102 Aligned Residues 208 % Identity 12% Template d1atga_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.20

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		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.
Predicted Secondary structure																																																																								.
Query SS confidence																																																																								.
Query Sequence		F	Q	T	L	L	V	S	R	A	L	E	K	L	G	Y	T	V	N	K	P	S	E	V	D	Y	N	V	G	Y	T	S	L	A	S	G	D	A	T	F	T	A	V	N	W	T	P	L	H	D	N	M	Y	E	A	A	G	G	D	K	K	F	Y	R	E	G	V	F	V	N	G	.	A	A	Q	G	Y	L	I	D	K
Query Conservation																																																																								.
Alig confidence																																													.	.	.	.																								.
Template Conservation																																													.	.	.	.
Template Sequence		T	L	E	Q	L	A	G	Q	F	A	K	Q	T	G	H	A	V	V	I	S	S	G	S	S	G	P	V	Y	A	Q	I	V	N	G	A	P	Y	N	V	F	F	S	A	.	.	.	.	D	E	K	S	P	E	K	L	D	N	Q	G	F	A	L	P	G	S	R	F	T	Y	A	I	G	K	L	V	L	W	S	A	K
Template Known Secondary structure																																		T	T				S					S	.	.	.	.	S	S									T	T		B		T	T															S	S
Template Predicted Secondary structure																																													.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.					.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure																																																												.
Query SS confidence																																																												.
Query Sequence		K	T	A	D	Q	Y	K	I	T	N	I	A	Q	L	K	D	P	K	I	A	K	L	F	D	T	N	G	D	G	K	A	D	L	T	G	C	N	P	G	W	G	C	E	G	A	I	N	H	Q	L	A	A	Y	E	L	T	N	T	.	V	T	H	N	Q	G	N	Y	A	A	M	M	A	D	T	I	S	R	Y	K	E
Query Conservation																																																												.
Alig confidence					.	.	.											.	.	.	.	.	.	.	.	.	.																																	.
Template Conservation					.	.	.											.	.	.	.	.	.	.	.	.	.
Template Sequence		P	G	L	.	.	.	V	D	N	Q	G	K	V	L	A	G	.	.	.	.	.	.	.	.	.	.	N	G	W	R	H	I	A	I	S	N	P	Q	I	A	P	Y	G	L	A	G	T	Q	V	L	T	H	L	G	L	L	D	K	L	T	A	Q	E	R	I	V	E	A	N	S	V	G	Q	A	H	S	Q	T	A	S
Template Known Secondary structure		T	T	T	.	.	.	S		T	T	S	G	G	G	G	S	.	.	.	.	.	.	.	.	.	.	S	S		S							T	T	T														T	T								T	T						S	S										T
Template Predicted Secondary structure					.	.	.											.	.	.	.	.	.	.	.	.	.
Template SS confidence
		90	.	.				.	.	.	.	.	.	.	100	.	.											.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	P	V	F	Y	Y	T	W	T	P	Y	W	V	S	N	E	L	K	P	G	K	D	V	V	W	L	Q	V	P	F	S	A	L	P	G	D	K	N	A	D	T	K	L	P	N	G	A	N	Y	G	F	P	V	S	T	M	H	I	V	A	N	K	A	W	A	E	K	N	P	A	A	A	K	L	F	A	I	M	Q
Query Conservation
Alig confidence												.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.
Template Conservation												.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.
Template Sequence		G	A	A	D	L	G	F	V	A	L	.	A	Q	I	I	Q	A	A	A	K	I	P	G	S	H	W	F	P	P	A	N	Y	Y	E	P	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	Q	Q	A	V	I	T	K	S	T	A	.	.	.	.	E	K	A	N	A	E	Q	F	M	S	W	M
Template Known Secondary structure		T	S	S	S						G	.	G	G	T			T	T	S			S	S							G	G	G	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							B	T	T		S	.	.	.	.												T
Template Predicted Secondary structure												.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.		.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.																		.	.	.	.	.	.	.	.	200	.	.					.	.	.	.	.	.	.	210	.	.	.	.
		281	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	V	A	D	I	N	A	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	G	P	K	A	V	A	I	I
Template Known Secondary structure		T	S
Template Predicted Secondary structure
Template SS confidence
		215	.	.	.	.	220	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions