Job Description P0AFM2 Confidence 99.62% Date Thu Jan 5 11:26:43 GMT 2012 Rank 16 Aligned Residues 240 % Identity 9% Template c3un6A_ PDB info PDB header:unknown function Chain: A: PDB Molecule:hypothetical protein saouhsc_00137; PDBTitle: 2.0 angstrom crystal structure of ligand binding component of abc-type2 import system from staphylococcus aureus with zinc bound Resolution 2.01 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.			.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure																						.	.
Query SS confidence																						.	.
Query Sequence		I	T	V	N	P	V	Q	S	T	I	T	E	E	T	F	Q	T	L	L	V	.	.	S	R	A	L	E	K	L	G	Y	T	V	N	K	P	S	E	V	D	Y	N	V	G	Y	T	S	L	A	S	G	D	A	T	F	T	A	V	N	W	T	P	L	H	D	N	M	Y	E	A	A	G	G	D	K	K	F	Y	R	E
Query Conservation																						.	.
Alig confidence																						.	.																																						.	.	.	.
Template Conservation																																																													.	.	.	.
Template Sequence		Q	V	I	K	I	G	Y	L	P	I	T	H	S	A	N	L	X	X	T	K	K	L	L	S	Q	Y	N	H	P	K	Y	K	L	E	L	V	K	F	N	N	W	P	D	L	X	D	A	L	N	S	G	R	I	D	G	A	S	T	L	.	.	.	.	I	E	L	A	X	K	S	K	Q	K	G	S	N	I	K	A	V
Template Known Secondary structure										S	S	G	G	G												T	S	S	S		S	S								S	S										T	T	S	S	S						.	.	.	.										T	T
Template Predicted Secondary structure																																																													.	.	.	.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.					.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.		.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure																																																						.
Query SS confidence																																																						.
Query Sequence		G	V	F	V	N	G	A	A	Q	G	Y	L	I	D	K	K	T	A	D	Q	Y	K	I	T	N	I	A	Q	L	K	D	P	K	I	A	K	L	F	D	T	N	G	D	G	K	A	D	L	T	G	C	N	.	P	G	W	G	C	E	G	A	I	N	H	Q	L	A	A	Y	E	L	T	N	T	V	T	H	N	Q	G
Query Conservation																																																						.
Alig confidence									.										.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template Conservation									.										.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	L	G	H	H	E	G	.	N	V	I	X	G	Q	K	G	X	.	.	.	.	H	L	N	E	F	N	N	N	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	D	Y	H	F	G	I	P	H	R	Y	S	T	H	Y	L	L	L	E	E	L	R	K	Q	L	K	I	K	P	G	H	F	S	Y	H	E
Template Known Secondary structure				S					.						S	T	T		.	.	.	.		G	G	G			S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S							S		S	S	S													T	T			T	T	S
Template Predicted Secondary structure									.										.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		111	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.					.	.	.	130	.	.	.	.	.															.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Y	A	A	M	M	A	D	T	I	S	R	Y	K	E	G	K	P	V	F	Y	Y	T	W	T	P	Y	W	V	S	N	E	L	K	P	G	K	D	V	V	W	L	Q	V	P	F	S	A	L	P	G	D	K	N	A	D	T	K	L	P	N	G	A	N	Y	G	F	P	V	S	T	M	H	I	V	A	N	K	A	W
Query Conservation
Alig confidence					.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		X	S	P	.	.	.	A	E	X	P	A	A	L	S	E	H	R	I	T	G	Y	S	V	A	E	P	F	G	A	L	G	E	K	L	G	K	G	K	T	L	K	H	G	D	D	V	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	D	A	Y	C	C	V	L	V	L	R	G	E	L
Template Known Secondary structure				G	.	.	.	G	G							T	T	S		S						T	T								S	S								G	G	G	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure					.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		172	.	.				.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.																				.	.	.	.	220	.	.	.	.	.	.	.	.	.
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	K	N	P	A	A	A	K	L	F	A	I	M	Q	L	P	V	A	D	I	N	A	Q	N	A	I	M	H	D	G	K	A	S	E	G	D	I	Q	G	H	V	D	G	W	I	K	A	H	Q	Q	Q	F	D	G	W	V	N
Query Conservation
Alig confidence													.	.	.	.	.	.												.	.	.	.
Template Conservation													.	.	.	.	.	.												.	.	.	.
Template Sequence		L	D	Q	H	K	D	V	A	Q	A	F	.	.	.	.	.	.	V	Q	D	Y	K	K	S	G	F	K	X	.	.	.	.	N	D	R	K	Q	S	V	D	I	X	T	H	H	F	K	Q	S	R	D	V	L	T	Q	S	A	A
Template Known Secondary structure													.	.	.	.	.	.											T	.	.	.	.	T	S												S	S	S
Template Predicted Secondary structure													.	.	.	.	.	.												.	.	.	.
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240							.	.	.	.	.	.	.	.	.	250	.					.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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