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Job DescriptionP0AFM2
Confidence55.70%DateThu Jan 5 11:26:43 GMT 2012
Rank133Aligned Residues109
% Identity15%Templatec3rpwA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:abc transporter; PDBTitle: the crystal structure of an abc transporter from rhodopseudomonas2 palustris cga009
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   27..30.........40...... ...50.........60......... 70......... 80.....
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Query Sequence  KGITVNPVQSTITEETFQTL. LVSRALEKLGYTVNKPSEVDYNV. GYTSLASGDA. . TFTAVN. . . . . . . . . . . . . . . . .
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Template Sequence  QSNVVIXQDPGGGYGDALRKVXYDPFEKETGIKVVTVQEARSGPRIKAQAEAGKAQWDLTFIFDQETKLLGDCCLADIDY
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   28.30.........40.........50.........60.........70.........80.........90.........100.......
 
   86...90.........100.........110.........120......... 130.....
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Query Sequence  . WTPLHDNMYEAAGGDKKFYREGVFVNGAAQGYLIDKKTADQYKI. TNIAQL
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Template Sequence  SKLSESAHKTLAAXPDNLKRKKGVALQVIGVGLVYNKDKFKGDKAPQTWADF
Template Known Secondary structure  GGS
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GGGTTTTTS
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   108.110.........120.........130.........140.........150.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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