Job Description P0AFM2 Confidence 97.40% Date Thu Jan 5 11:26:43 GMT 2012 Rank 35 Aligned Residues 225 % Identity 12% Template c3lr1A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:tungstate abc transporter, periplasmic tungstate- PDBTitle: the crystal structure of the tungstate abc transporter from2 geobacter sulfurreducens Resolution 1.80 Å

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		28	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		G	I	T	V	N	P	V	.	Q	S	T	I	T	E	E	T	F	Q	T	L	L	V	S	R	A	L	E	K	L	G	Y	T	V	N	K	P	S	E	V	D	Y	N	V	G	Y	T	S	L	A	S	G	D	A	T	F	T	A	V	N	W	T	P	L	H	D	N	M	Y	E	A	A	G	G	D	K	K	F	Y	R	E
Query Conservation									.
Alig confidence									.																											.																									.	.	.	.
Template Conservation																																				.																									.	.	.	.
Template Sequence		E	E	R	L	K	X	S	T	T	T	S	T	Q	D	S	G	L	L	K	V	L	L	P	P	F	E	K	K	N	N	V	K	V	D	.	V	I	A	V	G	T	G	Q	A	L	K	L	G	E	A	G	D	V	D	V	V	F	V	H	.	.	.	.	A	R	K	L	E	D	K	F	V	A	D	G	F	G	V	N	R
Template Known Secondary structure		S																													T					.															T	T	S		S						.	.	.	.											T	T	S
Template Predicted Secondary structure																																				.																									.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.					.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	F	V	N	G	A	A	Q	G	Y	L	I	D	K	K	T	A	D	Q	Y	K	I	T	N	I	A	Q	L	K	D	P	K	I	A	K	L	F	D	T	N	G	D	G	K	A	D	L	T	G	C	N	P	G	W	G	C	E	G	A	I	N	H	Q	L	A	A	Y	E	L	T	N	T	V	T	H	N	Q	G	N
Query Conservation
Alig confidence									.													.	.																		.	.	.	.	.
Template Conservation									.													.	.																		.	.	.	.	.
Template Sequence		K	D	V	X	Y	N	D	.	F	V	I	V	G	P	K	N	D	P	A	G	.	.	I	A	K	A	K	T	A	A	E	A	L	K	L	L	A	T	K	.	.	.	.	.	G	A	T	F	I	S	R	G	D	K	S	G	T	H	T	K	E	L	D	L	W	K	S	A	G	V	D	P	K	G	N	W	Y	V	E	A
Template Known Secondary structure									.							T	T		T	T		.	.	G	G	G		S	S												.	.	.	.	.	T								S	S	S													T	T					S	S	S
Template Predicted Secondary structure									.													.	.																		.	.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.		.	.	.	.	.	.	.	90	.	.	.	.			.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.						.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.		.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure																																					.
Query SS confidence																																					.
Query Sequence		Y	A	A	M	M	A	D	T	I	S	R	Y	K	E	G	K	P	V	F	Y	Y	T	W	T	P	Y	W	V	S	N	E	L	K	P	G	.	K	D	V	V	W	L	Q	V	P	F	S	A	L	P	G	D	K	N	A	D	T	K	L	P	N	G	A	N	Y	G	F	P	V	S	T	M	H	I	V	A	N	K	A	W
Query Conservation																																					.
Alig confidence							.	.	.	.																											.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	Q	G	X	G	.	.	.	.	P	V	I	T	X	A	T	E	R	R	A	Y	T	L	T	D	R	G	T	Y	N	A	F	K	G	A	K	T	D	L	V	I	L	F	Q	G	L	F	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	Y	G	I	X	A	V	N	P	K	K	F
Template Known Secondary structure			S				.	.	.	.										T														B	T	T	T	B												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T	T
Template Predicted Secondary structure							.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		148	.	150	.	.					.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.																					.	.	.	.	.	.	.	.	200	.	.	.
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	K	N	P	A	A	A	K	L	F	A	I	M	Q	L	P	V	A	D	I	N	A	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	H	V	K	Y	D	L	A	X	K	L	I	D	Y	V	T	G	P	E	G	L	K	I	I
Template Known Secondary structure		T	T	S													T	S
Template Predicted Secondary structure
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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