Job Description P0AFM2 Confidence 68.73% Date Thu Jan 5 11:26:43 GMT 2012 Rank 113 Aligned Residues 62 % Identity 13% Template c3ftoA_ PDB info PDB header:peptide binding protein Chain: A: PDB Molecule:oligopeptide-binding protein oppa; PDBTitle: crystal structure of oppa in a open conformation Resolution 2.38 Å

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		26	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.								.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure														.																																						.	.	.	.	.	.	.
Query SS confidence														.																																						.	.	.	.	.	.	.
Query Sequence		G	K	G	I	T	V	N	P	V	Q	S	T	.	I	T	E	E	T	F	Q	T	L	L	V	S	R	A	L	E	K	L	G	Y	T	V	N	K	P	S	E	V	D	Y	N	V	G	Y	T	S	L	.	.	.	.	.	.	.	A	S	G	D	A	T	F	T	A	V	N	W	T	P
Query Conservation														.																																						.	.	.	.	.	.	.
Alig confidence														.																								.														.	.	.	.	.	.	.
Template Conservation																																						.
Template Sequence		G	K	E	L	S	L	V	Y	A	A	R	V	G	D	A	N	A	E	T	I	A	Q	N	Y	I	Q	Q	W	K	K	I	G	V	K	V	S	.	L	Y	N	G	K	L	X	E	F	N	S	W	V	D	H	X	T	T	P	P	G	A	N	D	W	D	I	T	D	G	S	W	S	L
Template Known Secondary structure		T										B	S		S	T	T															T	T					.		G	G	G	S		B											S	T	T			S	S		S
Template Predicted Secondary structure																																						.
Template SS confidence
		406	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.		.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions