Job Description P0AFM2 Confidence 100.00% Date Thu Jan 5 11:26:43 GMT 2012 Rank 9 Aligned Residues 152 % Identity 20% Template c3chgB_ PDB info PDB header:ligand binding protein Chain: B: PDB Molecule:glycine betaine-binding protein; PDBTitle: the compatible solute-binding protein opuac from bacillus2 subtilis in complex with dmsa Resolution 2.80 Å

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		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	D	L	T	G	C	N	P	G	W	G	C	E	G	A	I	N	H	Q	L	A	A	Y	E	L	T	N	T	V	T	H	N	Q	G	N	Y	A	A	M	M	A	D	T	I	S	R	Y	K	E	G	K	P	V	F	Y	Y	T	W	T	P	Y	W	V	S	N	E	L	K	P	G	K	D	V	V	W	L	Q	V	P
Query Conservation
Alig confidence																														.																																								.	.	.	.
Template Conservation																														.																																								.	.	.	.
Template Sequence		N	K	T	I	I	G	I	D	P	G	S	G	I	M	S	L	T	D	K	A	M	K	D	Y	D	L	N	D	.	W	T	L	I	S	A	S	S	A	A	M	T	A	T	L	K	K	S	Y	D	R	K	K	P	I	I	I	T	G	W	T	P	H	W	M	F	S	R	Y	.	.	.	.	K	L	K	Y	L	D	D	P
Template Known Secondary structure										T	T	S													T	T		T	T	.																				T	T	T									S	S		T					S	.	.	.	.						B		T
Template Predicted Secondary structure																														.																																								.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.					.	.	.	.	.	.	.	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence		F	S	A	L	P	G	D	K	N	A	D	T	K	L	P	N	G	A	N	Y	G	F	P	V	S	T	M	H	I	V	A	N	K	A	W	A	E	K	N	P	A	A	A	K	L	F	A	I	M	Q	L	P	V	A	D	I	N	A	Q	N	A	I	M	H	D	G	K	A	S	E	G	D	I	Q	G	H	V	D	G	W
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.
Template Sequence		K	Q	S	Y	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	E	I	H	T	I	T	R	K	G	F	S	K	E	Q	P	N	A	A	K	L	L	S	Q	F	K	W	T	Q	D	E	M	G	E	I	M	I	K	V	.	.	.	.	E	E	G	E	K	P	A	K	V	A	A	E	Y
Template Known Secondary structure		T		S	S		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S									T	T													T	T																.	.	.	.		T	T
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.
Template SS confidence
		90	.	.	.	.	.																		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.					.	.	.	.	140	.	.	.	.	.	.	.	.
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	A	H	Q	Q	Q	F	D	G	W	V	N	E	A	L	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	N	K	H	K	D	Q	I	A	E	W	T	K	G	V	Q	K	V
Template Known Secondary structure													T	T	T
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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