Job Description P0AFM2 Confidence 93.24% Date Thu Jan 5 11:26:43 GMT 2012 Rank 62 Aligned Residues 237 % Identity 13% Template c2pt1A_ PDB info PDB header:metal transport Chain: A: PDB Molecule:iron transport protein; PDBTitle: futa1 synechocystis pcc 6803 Resolution 2.00 Å

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.					.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.
Query SS confidence																																														.	.	.	.
Query Sequence		N	P	V	Q	S	T	I	T	E	E	T	F	Q	T	L	L	V	S	R	A	L	E	K	L	G	Y	T	V	N	K	P	S	E	V	D	Y	N	V	G	Y	T	S	L	A	.	.	.	.	S	G	D	A	T	F	T	A	V	N	W	T	P	L	H	D	N	M	Y	E	A	A	G	G	D	K	K	F	Y	R	E	G
Query Conservation																																														.	.	.	.
Alig confidence																															.															.	.	.	.
Template Conservation																															.
Template Sequence		E	I	N	L	Y	S	S	R	H	Y	N	T	D	N	E	L	Y	A	K	F	T	A	E	T	G	I	K	V	N	.	L	I	E	G	K	A	D	E	L	L	E	R	I	K	S	E	G	A	N	S	P	A	D	V	L	L	T	V	D	L	A	R	L	W	R	A	E	E	D	G	I	F	Q	P	V	Q	S	E	I	L
Template Known Secondary structure								S				T	T																		.																	G	G	G										S										T	T		B
Template Predicted Secondary structure																															.
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		108	.	110	.	.	.																.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	F	V	N	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	Q	G	Y	L	I	D	K	K	T	A	D	Q	Y	K	I	T	N	I	A	Q	L	K	D	P	K	I	A	K	L	F	D	T	N	G	D	G	K	A	D	L	T	G	C	N	P	G	W	G	C	E	G	A	I	N	H	Q	L	A
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.	.	.	.
Template Sequence		E	T	N	V	P	E	Y	L	R	S	P	D	G	M	W	F	G	F	T	K	R	A	R	V	I	M	Y	N	K	G	K	V	K	P	E	E	L	S	T	Y	E	E	L	A	D	P	K	W	K	G	R	V	.	.	.	.	.	.	.	.	.	I	I	R	S	S	S	N	E	Y	N	Q	S	L	V	A	S	L	V	V
Template Known Secondary structure					S		G	G	G	B		T	T	S	S															T	T	T			G	G	G				S	G	G	G	G	S	G	G	G	T	T		B	.	.	.	.	.	.	.	.	.					T	T	S
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.										.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		173	.	.								.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.
Query Sequence		A	Y	E	.	.	.	.	.	.	.	L	T	N	T	V	T	H	N	Q	G	N	Y	A	A	M	M	A	D	T	I	S	R	Y	K	E	G	K	P	V	F	Y	Y	T	W	T	P	Y	W	V	S	N	E	L	K	P	G	K	D	V	V	W	L	Q	V	P	F	S	A	L	P	G	D	K	N	A	D	T	K	L	P
Query Conservation					.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.	.
Template Sequence		A	D	G	E	E	S	T	L	A	W	A	K	G	F	V	S	N	F	A	R	E	P	Q	G	N	D	T	A	Q	I	E	A	V	S	S	G	E	A	D	L	T	L	A	N	T	Y	Y	M	G	R	L	L	E	.	.	.	.	.	.	.	.	.	S	E	D	P	A	Q	K	A	I	A	E	N	V	G	V	F	F	P
Template Known Secondary structure																		T	B	S	S				S												T	S		S														T	.	.	.	.	.	.	.	.	.		S										T
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.										.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	G	A	N	Y	G	F	P	V	S	T	M	H	I	V	A	N	K	A	W	A	E	K	N	P	A	A	A	K	L	F	A	I	M	Q	L	P	V	A	D	I	N	A	Q
Query Conservation
Alig confidence																					.	.
Template Conservation																					.	.
Template Sequence		N	Q	E	G	R	G	T	H	V	N	V	S	G	V	G	V	V	K	T	.	.	A	P	N	R	E	G	A	V	K	F	I	E	F	L	V	S	E	P	A	Q	A	F	L
Template Known Secondary structure			T	T	T	T		B										B	T	T	.	.		T	T												T	S
Template Predicted Secondary structure																					.	.
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.			.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions