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Job DescriptionP75821
Confidence99.29%DateThu Jan 5 12:14:34 GMT 2012
Rank90Aligned Residues234
% Identity14%Templatec3v8bC_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:putative dehydrogenase, possibly 3-oxoacyl-[acyl-carrier PDBTitle: crystal structure of a 3-ketoacyl-acp reductase from sinorhizobium2 meliloti 1021
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40... ......50.........60..... ....70.
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Query Sequence  VLVTGATSGLGRNAVEFLCQKGISVRATGRNEAMGKLLEKM. . . . . . GAEFVPADLTELVSSQAKVMLA. . . . . GIDTLW
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Template Sequence  ALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQXRNAVRDLVLKFGHLDIVV
Template Known Secondary structure  STTSTT
SSTTS


TT
S


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   8.10.........20.........30.........40.........50.........60.........70.........80.......
 
   72....... 80.........90.........100.........110.........120.........130.........140........
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Query Sequence  HCSSFTSP. . . WGTQQAFDLANVRATRRLGEWAVAWGVRNFIHISSPSLYFDYHHHRDIKEDFRPHRFANEFARSKAASE
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Template Sequence  ANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQVAI
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TTTS
TTT


SBTTTB

STT
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   88.90.........100.........110.........120.........130.........140.........150.........160.......
 
   149150.........160.........170.........180.........190.........200.........210.........220........
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Query Sequence  EVINMLSQANPQTRFTILRPQSLFGPHDKVFIPRLAHMMHHYGSILLPHGGSALVDMTYYENAVHAMWLASQEACDKLPS
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Template Sequence  VQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIRFLV. SERARHVT
Template Known Secondary structure  GGGTS
BSS
TT

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S




TT
S
GGGTTS
B
T.SGGGTT

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   168.170.........180.........190.........200.........210.........220.........230........ .240......
 
   229230.......
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Query Sequence  GRVYNITNG
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Template Sequence  GSPVWIDGG
Template Known Secondary structure  S
STT
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   247..250.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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