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Job DescriptionP75821
Confidence99.11%DateThu Jan 5 12:14:34 GMT 2012
Rank94Aligned Residues231
% Identity19%Templatec3toxG_
PDB info PDB header:oxidoreductaseChain: G: PDB Molecule:short chain dehydrogenase; PDBTitle: crystal structure of a short chain dehydrogenase in complex with2 nad(p) from sinorhizobium meliloti 1021
Resolution1.93 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40... ......50.........60..... ....70
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Query Sequence  KVLVTGATSGLGRNAVEFLCQKGISVRATGRNEAMGKLLEKM. . . . . . GAEFVPADLTELVSSQAKVMLA. . . . . GIDTL
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Template Sequence  IAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGLDTA
Template Known Secondary structure  SSTTSTT
S
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   71........80.........90.........100.........110.........120.........130.........140.........150
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Query Sequence  WHCSSFTSPWGTQQAFDLANVRATRRLGEWAVAWGVRNFIHISSPSLYFDYHHHRDIKEDFRPHRFANEFARSKAASEEV
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Template Sequence  FNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGL
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S
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GGG

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SBTTTB

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   90.........100.........110.........120.........130.........140.........150.........160.........
 
   151....... .160.........170.........180.........190.........200.........210.........220........
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Query Sequence  INMLSQAN. . PQTRFTILRPQSLFGPHDKVFIPRLAHMMHHYGSILLPHGGSALVDMTYYENAVHAMWLASQEACDKLPS
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Template Sequence  VQALAVELGARGIRVNALLPGGTDTPANFANLAPETRGFVEGLHA. . . . . . . . LKRIARPEEIAEAALYLASD. GASFVT
Template Known Secondary structure  TTT
SBSSTTSGGG

TTTST........TSS
B
SG.GGTT

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   170.........180.........190.........200.........210.... .....220.........230.... .....240
 
   229230.........240.
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Query Sequence  GRVYNITNGEHRT
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Template Sequence  GAALLADGGASVT
Template Known Secondary structure  S
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   244.....250......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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