Job Description P75821 Confidence 98.85% Date Thu Jan 5 12:14:34 GMT 2012 Rank 157 Aligned Residues 194 % Identity 16% Template c3rkrC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:short chain oxidoreductase; PDBTitle: crystal structure of a metagenomic short-chain oxidoreductase (sdr) in2 complex with nadp Resolution 2.42 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.							.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.					.	.	.	.	.	.	70	.
Predicted Secondary structure																																										.	.	.	.	.	.																							.	.	.	.
Query SS confidence																																										.	.	.	.	.	.																							.	.	.	.
Query Sequence		K	V	L	V	T	G	A	T	S	G	L	G	R	N	A	V	E	F	L	C	Q	K	G	I	S	V	R	A	T	G	R	N	E	A	M	G	K	L	L	E	.	.	.	.	.	.	K	M	G	A	E	F	V	P	A	D	L	T	E	L	V	S	S	Q	A	K	V	M	.	.	.	.	L	A	G	I	D	T	L	W
Query Conservation																																										.	.	.	.	.	.																							.	.	.	.
Alig confidence																																										.	.	.	.	.	.																							.	.	.	.
Template Conservation
Template Sequence		V	A	V	V	T	G	A	S	R	G	I	G	A	A	I	A	R	K	L	G	S	L	G	A	R	V	V	L	T	A	R	D	V	E	K	L	R	A	V	E	R	E	I	V	A	A	G	G	E	A	E	S	H	A	C	D	L	S	H	S	D	A	I	A	A	F	A	T	G	V	L	A	A	H	G	R	C	D	V	L
Template Known Secondary structure							S		S	S													T	T								S	S	G	G	G	G										T	T										T	T																	S
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	C	S	S	F	T	S	P	W	G	T	Q	Q	A	F	D	L	A	N	V	R	A	T	R	R	L	G	E	W	A	V	A	W	G	V	R	N	F	I	H	I	S	S	P	S	L	Y	F	D	Y	H	H	H	R	D	I	K	E	D	F	R	P	H	R	F	A	N	E	F	A	R	S	K	A	A	S	E	E	V	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	N	N	A	G	V	G	W	F	G	G	P	L	H	T	M	K	P	A	E	W	D	A	L	I	A	V	N	L	K	A	P	Y	L	L	L	R	A	F	A	P	A	M	I	A	A	K	R	G	H	I	I	N	I	S	S	L	A	G	K	N	P	V	A	D	G	A	A	Y	T	A	S	K	W	G	L	N	G	L	M
Template Known Secondary structure											S	S		G	G	G	S													T																	T	T									S			S	S	S			T	T
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		152	.	.	.	.	.	.			.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure									.	.
Query SS confidence									.	.
Query Sequence		N	M	L	S	Q	A	N	.	.	P	Q	T	R	F	T	I	L	R	P	Q	S	L	F	G	P	H	D	K	V	F	I	P	R	L	A	H	M	M	H	H	Y	G	S	I	L	L	P	H	G	G	S	A	L	V	D	M	T	Y	Y	E	N	A	V	H	A	M	W	L	A	S	Q	E	A	C	D
Query Conservation									.	.
Alig confidence									.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	S	A	A	E	E	L	R	Q	H	Q	V	R	V	S	L	V	A	P	G	S	V	R	A	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	I	E	P	D	D	I	A	D	V	V	A	L	L	A	T	Q	A	D	Q
Template Known Secondary structure									G	G	G	T															T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T															T			T	T
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.																														.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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