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Job DescriptionP75821
Confidence98.96%DateThu Jan 5 12:14:34 GMT 2012
Rank119Aligned Residues229
% Identity12%Templatec3rihB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:short chain dehydrogenase or reductase; PDBTitle: crystal structure of a putative short chain dehydrogenase or reductase2 from mycobacterium abscessus
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40 .........50.........60... .....
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Query Sequence  KVLVTGATSGLGRNAVEFLCQKGISVRATGRNEAMGKLL. . . . . . . EKMGAEFVPADLTELVSSQAKVM. . . . . . LAGID
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Template Sequence  SVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGALDV
Template Known Secondary structure  TTTTSTT
SSGGGGTTSSSS


TT
S


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   21........30.........40.........50.........60.........70.........80.........90.........100
 
   6970.........80.........90.........100.........110.........120.........130.........140........
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Query Sequence  TLWHCSSFTSPWGTQQAFDLANVRATRRLGEWAVAWGVRNFIHISSPSLYFDYHHHRDIKEDFRPHRFANEFARSKAASE
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Template Sequence  VCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGASKAAQLGF
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TTT

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TT
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   101........110.........120.........130.........140.........150.........160.........170.........180
 
   149150.........160.........170.........180.........190.........200.........210.........220........
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Query Sequence  EVINMLSQANPQTRFTILRPQSLFGPHDKVFIPRLAHMMHHYGSILLPHGGSALVDMTYYENAVHAMWLASQEACDKLPS
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Template Sequence  MRTAAIELAPRGVTVNAILPGNILTEGLVDMGEEYISGMARSIPMGMLGSP. . . . . . . . . VDIGHLAAFLA. TDEAGYIT
Template Known Secondary structure  GGGT

SB

TT
TT
TTSS
B
..........SGGGTT

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   181........190.........200.........210.........220.........230. ........240.. .......250
 
   229230.........240
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Query Sequence  GRVYNITNGEHR
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Template Sequence  GQAIVVDGGQVL
Template Known Secondary structure  S
STTTT
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   251........260..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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