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Job DescriptionP75821
Confidence99.51%DateThu Jan 5 12:14:34 GMT 2012
Rank86Aligned Residues202
% Identity13%Templatec3r6dA_
PDB info PDB header:lyase, isomeraseChain: A: PDB Molecule:nad-dependent epimerase/dehydratase; PDBTitle: crystal structure of nad-dependent epimerase/dehydratase from2 veillonella parvula dsm 2008 with cz-methylated lysine
Resolution1.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  KVLVTGATSGLGRNAVEFLCQKGISVRATGRNEAMGKLLEKMGAEFVPADLTELVSSQAKVMLAGIDTLWHCSSFTSPWG
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Template Sequence  YITILGAAGQIAQLTATLLTYTDXHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGLEQAVTNAEVVFVGAXESGS. .
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   4.....10.........20.........30.........40.........50.........60.........70.........80.
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  TQQAFDLANVRATRRLGEWAVAWGVRNFIHISSPSLYFDYHHHRDIKEDFRPHRFANEFARSKAASEEVINMLSQANPQT
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Template Sequence  . . . . . . . . . . . . . . . DXASIVKALSRNIRRVIGVSXAGLSGEFPVALEKWTFDNLPISYVQGERQARNVLRE. . . . . SNL
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   84.....90.........100.........110.........120.........130.........140 ...
 
   162.......170.........180.........190.........200.........210.........220.........230........
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Query Sequence  RFTILRPQSLFGPHDKVFIPRLAHMMHHYGSILLPHGGSALVDMTYYENAVHAMWLASQEACDKLPSGRVYNITNGE
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Template Sequence  NYTILRLTWLYNDPETD. . . . . . . . . . . . . YELIPEGAQFNDAQVSREAVVKAIFDILHAADETPFHRTSIGVGEPG
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   145....150.........160. ........170.........180.........190.........200........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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