Job Description P75821 Confidence 98.56% Date Thu Jan 5 12:14:34 GMT 2012 Rank 245 Aligned Residues 234 % Identity 13% Template c3qljB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:short chain dehydrogenase; PDBTitle: crystal structure of a short chain dehydrogenase from mycobacterium2 avium Resolution 1.80 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.																	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Query Sequence		K	V	L	V	T	G	A	T	S	G	L	G	R	N	A	V	E	F	L	C	Q	K	G	I	S	V	R	A	T	G	R	N	E	A	M	G	K	L	L	E	K	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	E	F	V	P	A	D	L	T	E	L	V	S	S	Q	A	K	V	M	L	.
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Alig confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template Conservation
Template Sequence		V	V	I	V	T	G	A	G	G	G	I	G	R	A	H	A	L	A	F	A	A	E	G	A	R	V	V	V	N	D	I	G	V	G	L	D	G	S	P	A	S	G	G	S	A	A	Q	S	V	V	D	E	I	T	A	A	G	G	E	A	V	A	D	G	S	N	V	A	D	W	D	Q	A	A	G	L	I	Q	T	A
Template Known Secondary structure						T	T	T	T	S													T	T										B		T	T	S	S	B	T		T	T	S												T	T										T	T	S
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
						65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.					.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.																													.	.	.	.
Query SS confidence		.	.	.	.																													.	.	.	.
Query Sequence		.	.	.	.	A	G	I	D	T	L	W	H	C	S	S	F	T	S	P	W	G	T	Q	Q	A	F	D	L	A	N	V	R	.	.	.	.	A	T	R	R	L	G	E	W	A	V	A	W	G	V	R	N	F	I	H	I	S	S	P	S	L	Y	F	D	Y	H	H	H	R	D	I	K	E	D	F	R	P	H	R	F
Query Conservation		.	.	.	.																													.	.	.	.
Alig confidence		.	.	.	.																													.	.	.	.
Template Conservation
Template Sequence		V	E	T	F	G	G	L	D	V	L	V	N	N	A	G	I	V	R	D	R	M	I	A	N	T	S	E	E	E	F	D	A	V	I	A	V	H	L	K	G	H	F	A	T	M	R	H	A	A	A	Y	W	R	G	L	S	K	A	G	K	A	V	D	G	R	I	I	N	T	S	S	G	A	G	L	Q	G	S	V	G
Template Known Secondary structure						S															B		G	G	G																																		T	T																			B	T	T
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	E	F	A	R	S	K	A	A	S	E	E	V	I	N	M	L	S	Q	A	N	P	Q	T	R	F	T	I	L	R	P	Q	S	L	F	G	P	H	D	K	V	F	I	P	R	L	A	H	M	M	H	H	Y	G	S	I	L	L	P	H	G	G	S	A	L	V	D	M	T	Y	Y	E	N	A	V	H	A	M	W
Query Conservation
Alig confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	G	N	Y	S	A	A	K	A	G	I	A	T	L	T	L	V	G	A	A	E	M	G	R	Y	G	V	T	V	N	A	I	A	P	S	A	R	T	R	F	D	A	M	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	N	V	S	P	L	V	V
Template Known Secondary structure		B																						G	G	G	T										T	T					T	T		G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	T
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.																												.	.	.	.	.	.	.	220
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.																		.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	A	S	Q	E	A	C	D	K	L	P	S	G	R	V	Y	N	I	T	N	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	H	R	T	L	R	S	I	V	Q	K	L	I	D	E	L	N	I	D	C	R	I	R	S	V	P
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.
Template Sequence		W	L	G	S	.	A	E	A	R	D	V	T	G	K	V	F	E	V	E	G	G	K	I	R	V	A	E	G	W	A	H	G	P	Q	I	D	K	G	A	R	W	D	P	A	E	L	G	P	V	V	A	D	L	L	G	K	A	R	P	P	V	P	V	Y
Template Known Secondary structure				T	S	.	G	G	G	T	T			S							T	T																	S	S				G	G	G												S							B
Template Predicted Secondary structure						.
Template SS confidence
		237	.	.	240		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions