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Job DescriptionP75821
Confidence98.99%DateThu Jan 5 12:14:34 GMT 2012
Rank111Aligned Residues234
% Identity10%Templatec3pgxB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:carveol dehydrogenase; PDBTitle: crystal structure of a putative carveol dehydrogenase from2 mycobacterium paratuberculosis bound to nicotinamide adenine3 dinucleotide
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.. .......50.........60...
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Query Sequence  VLVTGATSGLGRNAVEFLCQKGISVRATGRNEAMGKLLEK. . . . . . . . . . . . . . . . . . . MGAEFVPADLTELVSSQAKVM
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Template Sequence  AFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAALRELVA
Template Known Secondary structure  STTSTT


S


TT

S



TTT



TT
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   14.....20.........30.........40.........50.........60.........70.........80.........90...
 
   64.....70.........80.........90.........100.........110.........120.........130.......
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Query Sequence  . . . . . . LAGIDTLWHCSSFTSPWGTQQAFDLANVRATRRLGEWAVAWGVRNFIHISSPSLYFDYHHHRDIKEDFRPHRFA
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Template Sequence  DGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGH
Template Known Secondary structure  S









B
GGG

T
S


GGGTS

TTB
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   94.....100.........110.........120.........130.........140.........150.........160.........170...
 
   138.140.........150.........160.........170.........180.........190.........200.........210.......
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Query Sequence  NEFARSKAASEEVINMLSQANPQTRFTILRPQSLFGPHDKVFIPRLAHMMHHYGSILLPHGGSALVDMTYYENAVHAMWL
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Template Sequence  YSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQPNGFMTADEVADVVAW
Template Known Secondary structure  GGGT
SB
SGGG
T
GGGGGGS

BTTB
SS
B
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   174.....180.........190.........200.........210.........220.........230.........240.........250...
 
   218.220.........230.......
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Query Sequence  ASQEACDKLPSGRVYNITNG
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Template Sequence  LA. GDGSGTLTGTQIPVDKG
Template Known Secondary structure  .SGGGTT
SS
STT
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   254. ....260.........270..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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