 |
Job Description | P75821 | Confidence | 96.55% | Date | Thu Jan 5 12:14:34 GMT 2012 |
Rank | 446 | Aligned Residues | 62 |
% Identity | 23% | Template | c3pduF_ |
PDB info |
PDB header:oxidoreductase | Chain: F: PDB Molecule:3-hydroxyisobutyrate dehydrogenase family protein; |
PDBTitle: crystal structure of gamma-hydroxybutyrate dehydrogenase from2 geobacter sulfurreducens in complex with nadp+
|
Resolution | 1.89 Å |
|
 |
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | V | L | V | T | G | A | T | S | G | L | G | R | N | A | V | E | F | L | C | Q | K | G | I | S | V | R | A | T | G | R | N | E | A | M | G | K | L | L | E | K | M | G | A | E | F | V | P | A | D | L | T | E | L | V | S | S | Q | A | K | V | M | L | A | G | I | D | T | L | W |
Query Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|   |   |   |
|
|   |   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|   | . |
|   |
|
|   |   |
|
|   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   | . | . | . | . | . | . | . |   |
|   |   |
|   |   |   |   |   |
|   |
|   |   |   |
Template Sequence |   |
T | Y | G | F | L | G | L | . |
G | I | M | G | G | P | M | A | A | N | L | V | R | A | G | F | D | V | T | V | W | N | R | N | P | A | K | C | A | P | L | V | A | L | G | A | R | Q | A | . |
. |
. |
. |
. |
. |
. |
S | S | P | A | E | V | C | A | A | C | D | I | T | I | A | M |
Template Known Secondary structure |   |
|  |  |  |  |
|
| . | S | T | T |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |
| S | S | G | G | G | G |  |  |  |  |  |  | T |
|  |  |
| . | . | . | . | . | . | . | S | S |  |  |  |  |  |  |  |
| S |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | . | |
10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
. | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|