Job Description P75821 Confidence 98.72% Date Thu Jan 5 12:14:34 GMT 2012 Rank 210 Aligned Residues 214 % Identity 14% Template c3o38D_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:short chain dehydrogenase; PDBTitle: crystal structure of a short chain dehydrogenase from mycobacterium2 smegmatis Resolution 1.95 Å

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		2	.	.	.	.	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.								.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.					.	.	.	.	.	.
Predicted Secondary structure												.																																.	.	.	.	.	.	.																						.	.	.	.
Query SS confidence												.																																.	.	.	.	.	.	.																						.	.	.	.
Query Sequence		K	V	L	V	T	G	A	T	S	G	.	L	G	R	N	A	V	E	F	L	C	Q	K	G	I	S	V	R	A	T	G	R	N	E	A	M	G	K	L	L	E	K	.	.	.	.	.	.	.	M	G	A	E	F	V	P	A	D	L	T	E	L	V	S	S	Q	A	K	V	M	.	.	.	.	L	A	G	I	D	T
Query Conservation												.																																.	.	.	.	.	.	.																						.	.	.	.
Alig confidence												.																																.	.	.	.	.	.	.																						.	.	.	.
Template Conservation
Template Sequence		V	V	L	V	T	A	A	A	G	T	G	I	G	S	T	T	A	R	R	A	L	L	E	G	A	D	V	V	I	S	D	Y	H	E	R	R	L	G	E	T	R	D	Q	L	A	D	L	G	L	G	R	V	E	A	V	V	C	D	V	T	S	T	E	A	V	D	A	L	I	T	Q	T	V	E	K	A	G	R	L	D
Template Known Secondary structure						S	S		S	S	S	S												T	T								S														T	T	S	S	S									T	T																	S
Template Predicted Secondary structure
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	W	H	C	S	S	F	T	S	P	W	G	T	Q	Q	A	F	D	L	A	N	V	R	A	T	R	R	L	G	E	W	A	V	A	W	G	V	R	N	F	I	H	I	S	S	P	S	L	Y	F	D	Y	H	H	H	R	D	I	K	E	D	F	R	P	H	R	F	A	N	E	F	A	R	S	K	A	A	S	E	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	V	N	N	A	G	L	G	G	Q	T	P	V	V	D	M	T	D	E	E	W	D	R	V	L	N	V	T	L	T	S	V	M	R	A	T	R	A	A	L	R	Y	F	R	G	V	D	H	G	G	V	I	V	N	N	A	S	V	L	G	W	R	A	Q	H	S	Q	S	H	Y	A	A	A	K	A	G	V	M	A
Template Known Secondary structure															G	G	G														T																T	S	S											G	G	G	T				T	T
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	N	M	L	S	Q	A	N	P	Q	T	R	F	T	I	L	R	P	Q	S	L	F	G	P	H	D	K	V	F	I	P	R	L	A	H	M	M	H	H	Y	G	S	I	L	L	P	H	G	G	S	A	L	V	D	M	T	Y	Y	E	N	A	V	H	A	M	W	L	A	S	Q	E	A	C	D	K	L	P	S	G
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Sequence		L	T	R	C	S	A	I	E	A	V	E	F	G	V	R	I	N	A	V	S	P	S	I	A	R	H	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	F	G	R	A	A	E	P	W	E	V	A	A	T	I	A	F	L	A	.	S	D	Y	S	S	Y	M	T	G
Template Known Secondary structure											G	G	G	T															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	S	S																.	S	G	G	G	T	T			S
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.																								.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.
		230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	Y	N	I	T	N	G	E	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	V	V	S	V	S	S	Q	R	A
Template Known Secondary structure							S	S
Template Predicted Secondary structure
Template SS confidence
		253	.	.	.	.	.	.	260	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions