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Job DescriptionP75821
Confidence98.69%DateThu Jan 5 12:14:34 GMT 2012
Rank223Aligned Residues206
% Identity13%Templatec3kvoB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:hydroxysteroid dehydrogenase-like protein 2; PDBTitle: crystal structure of the catalytic domain of human hydroxysteroid2 dehydrogenase like 2 (hsdl2)
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40... ......50.........60.....
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Query Sequence  KVLVTGATSGLGRNAVEFLCQKGISVRATGRNEAMGKLLEKM. . . . . . . . . . . . . GAEFVPADLTELVSSQAKVMLA. . .
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Template Sequence  TVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKAIKK
Template Known Secondary structure  T
SSTTT
S
SS

SSS


T


TT
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   12.......20.........30.........40.........50.........60.........70.........80.........90.
 
   66...70.........80.........90.........100.........110.........120.........130.........140...
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Query Sequence  . . GIDTLWHCSSFTSPWGTQQAFDLANVRATRRLGEWAVAWGVRNFIHISSPSLYFDYHHHRDIKEDFRPHRFANEFARS
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Template Sequence  FGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIA
Template Known Secondary structure  S











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TTT
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   92.......100.........110.........120.........130.........140.........150.........160.........170.
 
   144.....150....... ..160.........170.........180.........190.........200.........210.........220..
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Query Sequence  KAASEEVINMLSQA. NPQTRFTILRPQSLFGPHDKVFIPRLAHMMHHYGSILLPHGGSALVDMTYYENAVHAMWLASQEA
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Template Sequence  KYGMSMYVLGMAEEFKGEIAVNALWPKTAIHTAAMDMLGGP. . . . . . . . . . . . . . . . GIESQCRKVDIIADAAYSIFQKP
Template Known Secondary structure  TTTT

SB
B


T................TGGGG
B
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   172.......180.........190.........200.........210.. .......220.........230.....
 
   223
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Query Sequence  C
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Template Sequence  K
Template Known Secondary structure  T
Template Predicted Secondary structure 
Template SS confidence 
   236
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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