Return to main results Retrieve Phyre Job Id

Job DescriptionP75821
Confidence100.00%DateThu Jan 5 12:14:34 GMT 2012
Rank53Aligned Residues273
% Identity17%Templatec3iusB_
PDB info PDB header:structural genomics, unknown functionChain: B: PDB Molecule:uncharacterized conserved protein; PDBTitle: the structure of a functionally unknown conserved protein2 from silicibacter pomeroyi dss
Resolution1.66 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  KVLVTGATSGLGRNAVEFLCQKGISVRATGRNEAMGKLLEKMGAEFVPADLTELVSSQAKVMLAGIDTLWHCSSFTSPWG
Query Conservation 











  
   

  
  
    
            
  
  

 
                   
       
Alig confidence 






.












































.................









Template Conservation 






.
 

  
   
   
  
    
                      .................          
Template Sequence  TLLSFGH. GYTARVLSRALAPQGWRIIGTSRNPDQXEAIRASGAEPLLWPGEE. . . . . . . . . . . . . . . . . PSLDGVTHLL
Template Known Secondary structure  T
.
GGGT
S
GGGTTSTTTS
.................


TT

Template Predicted Secondary structure 

.















.................






Template SS confidence 















































































   4.....10 .........20.........30.........40.........50..... ....60.....
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
Predicted Secondary structure 






















































Query SS confidence 















































































Query Sequence  TQQAFDLANVRATRRLGEWAVAWGVRNFIHISSPSLYFDYHHHRDIKEDFRPHRFANEFARSKAASEEVINMLSQANPQT
Query Conservation                                                                                  
Alig confidence 






































































....




Template Conservation                                                            
   
   
    ....     
Template Sequence  ISTAPDSGGDPVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARGRWRVXAEQQWQ. . . . AVPNL
Template Known Secondary structure 



BTTB
TGGG
SGGGS


TT

TTS




S....TSTT
Template Predicted Secondary structure 





























....


Template SS confidence 















































































   66...70.........80.........90.........100.........110.........120.........130...... ...140.
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
Predicted Secondary structure 






































Query SS confidence 















































































Query Sequence  RFTILRPQSLFGPHDKVFIPRLAHMMHHYGSILLPHGGSALVDMTYYENAVHAMWLASQEACDKLPSGRVYNITNGEHRT
Query Conservation             
                                
 
 
 
                            
Alig confidence 

















...........



































....










Template Conservation     


     
      ...........                 
 
   
            ....  

      
Template Sequence  PLHVFRLAGIYGPGRGPF. . . . . . . . . . . GGIRRIIKPGQVFSRIHVEDIAQVLAASXARPDPGA. . . . VYNVCDDEPVP
Template Known Secondary structure 

BTTBS

...........




TT

B
S

TT
....

S

B
Template Predicted Secondary structure 








...........














....





Template SS confidence 















































































   142.......150......... 160.........170.........180.........190..... ....200......
 
   242.......250.........260.........270.........280.........290.........300.........310...... ...320
Predicted Secondary structure 



























.
Query SS confidence 










































































.



Query Sequence  LRSIVQKLIDELNIDCRIRSVPYPMLDMIARSMERLGRKSAKEPPLTHYGVSKLNFDFTLDITRAQEELGYQPVI. TLDE
Query Conservation    
         
        
                                      
  
    

  
  .   
Alig confidence 



















...................



































.



Template Conservation    
    
    
       ...................                     
  
    

  
  

  
Template Sequence  PQDVIAYAAELQGLPLPPAV. . . . . . . . . . . . . . . . . . . DFDKADLTPXARSFYSENKRVRNDRIKEELGVRLKYPNYRV
Template Known Secondary structure  TT




...................GGG



TT




TT



S

S
Template Predicted Secondary structure 







...................
























Template SS confidence 















































































   212.......220.........230. ........240.........250.........260.........270..
 
   321........330
Predicted Secondary structure 
Query SS confidence 









Query Sequence  GIEKTAAWLR
Query Conservation   
        
Alig confidence 









Template Conservation 

   

   
Template Sequence  GLEALQADAE
Template Known Secondary structure 
Template Predicted Secondary structure 



Template SS confidence 









   273......280..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions