Job Description P75821 Confidence 98.38% Date Thu Jan 5 12:14:34 GMT 2012 Rank 270 Aligned Residues 196 % Identity 14% Template c3i1jB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:oxidoreductase, short chain PDBTitle: structure of a putative short chain dehydrogenase from2 pseudomonas syringae Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.										.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.					.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.																							.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.																							.	.	.	.
Query Sequence		V	L	V	T	G	A	T	S	G	L	G	R	N	A	V	E	F	L	C	Q	K	G	I	S	V	R	A	T	G	R	N	E	A	M	G	K	L	L	E	K	M	.	.	.	.	.	.	.	.	.	G	A	E	F	V	P	A	D	L	T	E	L	V	S	S	Q	A	K	V	M	L	A	.	.	.	.	G	I	D	T
Query Conservation																																											.	.	.	.	.	.	.	.	.																							.	.	.	.
Alig confidence																																											.	.	.	.	.	.	.	.	.																							.	.	.	.
Template Conservation
Template Sequence		I	L	V	T	G	A	A	R	G	I	G	A	A	A	A	R	A	Y	A	A	H	G	A	S	V	V	L	L	G	R	T	E	A	S	L	A	E	V	S	D	Q	I	K	S	A	G	Q	P	Q	P	L	I	I	A	L	N	L	E	N	A	T	A	Q	Q	Y	R	E	L	A	A	R	V	E	H	E	F	G	R	L	D
Template Known Secondary structure						S		S	S													T	T								S															T	T											T	T	T																		S
Template Predicted Secondary structure
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	W	H	C	S	S	F	T	S	P	W	G	T	Q	Q	A	F	D	L	A	N	V	R	A	T	R	R	L	G	E	W	A	V	A	W	G	V	R	N	F	I	H	I	S	S	P	S	L	Y	F	D	Y	H	H	H	R	D	I	K	E	D	F	R	P	H	R	F	A	N	E	F	A	R	S	K	A	A	S	E	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	L	L	H	N	A	S	I	I	G	P	R	T	P	L	E	Q	L	P	D	E	D	F	X	Q	V	X	H	V	N	V	N	A	T	F	X	L	T	R	A	L	L	P	L	L	K	R	S	E	D	A	S	I	A	F	T	S	S	S	V	G	R	K	G	R	A	N	W	G	A	Y	G	V	S	K	F	A	T	E	G
Template Known Secondary structure														S		G	G	G	S													T																	S	S	S									G	G	G	T	S			T	T
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		150	.	.	.	.	.	.				.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.
Query SS confidence									.	.	.
Query Sequence		V	I	N	M	L	S	Q	.	.	.	A	N	P	Q	T	R	F	T	I	L	R	P	Q	S	L	F	G	P	H	D	K	V	F	I	P	R	L	A	H	M	M	H	H	Y	G	S	I	L	L	P	H	G	G	S	A	L	V	D	M	T	Y	Y	E	N	A	V	H	A	M	W	L	A	S
Query Conservation									.	.	.
Alig confidence									.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	X	Q	T	L	A	D	E	L	E	G	V	T	A	V	R	A	N	S	I	N	P	G	A	T	R	T	G	X	R	A	A	Y	N	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	N	N	P	A	P	E	D	I	X	P	V	Y	L	Y	L	X
Template Known Secondary structure											T	T	T	S	S										S		S	S	T	T	T					G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	S			G	G	G	G
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210																						.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions