Job Description P75821 Confidence 99.96% Date Thu Jan 5 12:14:34 GMT 2012 Rank 60 Aligned Residues 286 % Identity 13% Template c3e48B_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:putative nucleoside-diphosphate-sugar epimerase; PDBTitle: crystal structure of a nucleoside-diphosphate-sugar epimerase2 (sav0421) from staphylococcus aureus, northeast structural genomics3 consortium target zr319 Resolution 1.60 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		M	K	V	L	V	T	G	A	T	S	G	L	G	R	N	A	V	E	F	L	C	Q	K	G	.	I	S	V	R	A	T	G	R	N	E	A	M	G	K	L	L	E	K	M	G	A	E	F	V	P	A	D	L	T	E	L	V	S	S	Q	A	K	V	M	L	A	G	I	D	T	L	W	H	C	S	S	F	T	S	P
Query Conservation																										.
Alig confidence																										.																																																							.
Template Conservation																																																																																	.
Template Sequence		X	N	I	X	L	T	G	A	T	G	H	L	G	T	H	I	T	N	Q	A	I	A	N	H	I	D	H	F	H	I	G	V	R	N	V	E	K	V	P	D	D	W	R	G	K	V	S	V	R	Q	L	D	Y	F	N	Q	E	S	X	V	E	A	F	K	G	X	D	T	V	V	F	I	P	S	I	I	H	P	S	.
Template Known Secondary structure								T	T	T	S													T	T		S	S						S		G	G	G	S		G	G	G	B	T	T	B							T	T										T	T		S											S		.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	G	T	Q	Q	A	F	D	L	A	N	V	R	A	T	R	R	L	G	E	W	A	V	A	W	G	V	R	N	F	I	H	I	S	S	P	S	L	Y	F	D	Y	H	H	H	R	D	I	K	E	D	F	R	P	H	R	F	A	N	E	F	A	R	S	K	A	A	S	E	E	V	I	N	M	L	S	Q	A	N	P
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	F	K	R	I	P	E	V	E	N	L	V	Y	A	A	K	Q	S	G	V	A	H	I	I	F	I	G	Y	Y	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	H	N	N	P	F	H	X	S	P	Y	F	G	Y	A	S	R	L	L	S	T	S
Template Known Secondary structure		.	.	.	.	.	.	.	.				T														T										S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	T				T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
										80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.																					110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	R	F	T	I	L	R	P	Q	S	L	F	G	P	H	D	K	V	F	I	P	R	L	A	H	M	M	H	H	Y	G	S	I	L	L	P	H	G	G	S	A	L	V	D	M	T	Y	Y	E	N	A	V	H	A	M	W	L	A	S	Q	E	A	C	D	K	L	P	S	G	R	V	Y	N	I	T	N	G	E	H
Query Conservation
Alig confidence																	.	.	.	.	.	.																																															.	.	.	.
Template Conservation																	.	.	.	.	.	.																																															.	.	.	.
Template Sequence		G	I	D	Y	T	Y	V	R	X	A	X	Y	X	D	P	.	.	.	.	.	.	L	K	P	Y	L	P	E	L	X	N	X	H	K	L	I	Y	P	A	G	D	G	R	I	N	Y	I	T	R	N	D	I	A	R	G	V	I	A	I	I	K	N	P	D	T	W	G	.	.	.	.	K	R	Y	L	L	S	G	Y	S
Template Known Secondary structure														S	T	T	.	.	.	.	.	.												T							T	T																						G	G	G	T	T	.	.	.	.	S
Template Predicted Secondary structure																	.	.	.	.	.	.																																															.	.	.	.
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.							.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.					.	.	.	.	.	.	.	200	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	T	L	R	S	I	V	Q	K	L	I	D	E	L	N	I	D	C	R	I	R	S	V	P	Y	P	M	L	D	M	I	A	R	S	M	E	R	L	G	R	K	S	A	K	E	P	P	L	T	H	Y	G	V	S	K	L	N	F	D	F	T	L	D	I	T	R	A	Q	E	E	L	G	Y	Q	P	V	I	T	L	D
Query Conservation
Alig confidence																															.	.	.	.	.	.																																										.
Template Conservation																															.	.	.	.	.	.																																										.
Template Sequence		Y	D	X	K	E	L	A	A	I	L	S	E	A	S	G	T	E	I	K	Y	E	P	V	S	L	E	T	F	A	.	.	.	.	.	.	E	X	Y	D	E	P	K	G	F	G	A	L	L	A	S	X	Y	H	A	G	A	R	G	L	L	D	Q	E	S	N	D	F	K	Q	L	V	N	D	Q	P	Q	.	T	L	Q
Template Known Secondary structure																S	S														.	.	.	.	.	.		T	T			S	T	T														T	T	T	T					S							S	S				.
Template Predicted Secondary structure																															.	.	.	.	.	.																																										.
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230							.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.		.	.	.
		320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	I	E	K	T	A	A	W	L	R	D	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	F	L	Q	E	N	I	L	E	H	H	H	H
Template Known Secondary structure					T	T	S					S	S
Template Predicted Secondary structure
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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