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Job DescriptionP75821
Confidence99.03%DateThu Jan 5 12:14:34 GMT 2012
Rank103Aligned Residues222
% Identity14%Templatec3cxtA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:dehydrogenase with different specificities; PDBTitle: quaternary complex structure of gluconate 5-dehydrogenase from2 streptococcus suis type 2
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.. .......50.........60.... .....70
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Query Sequence  KVLVTGATSGLGRNAVEFLCQKGISVRATGRNEAMGKLLEK. . . . . . MGAEFVPADLTELVSSQAKVML. . . . . AGIDTL
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Template Sequence  IALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGINAHGYVCDVTDEDGIQAMVAQIESEVGIIDIL
Template Known Secondary structure  T
SSTT
SSTT




TT
T



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   16...20.........30.........40.........50.........60.........70.........80.........90.....
 
   71........80.........90.........100.........110.........120.........130.........140.........150
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Query Sequence  WHCSSFTSPWGTQQAFDLANVRATRRLGEWAVAWGVRNFIHISSPSLYFDYHHHRDIKEDFRPHRFANEFARSKAASEEV
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Template Sequence  VNNAGIIRRVPMIEMTAAQFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTK
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GGGS
TT


GGGT


TT
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   96...100.........110.........120.........130.........140.........150.........160.........170.....
 
   151........160.........170.........180.........190.........200.........210.........220.........230
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Query Sequence  INMLSQANPQTRFTILRPQSLFGPHDKVFIPRLAHMMHHYGSILLPHGGSALVDMTYYENAVHAMWLASQEACDKLPSGR
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Template Sequence  NIASEYGEANIQCNGIGPGYIATPQTHPFDQFIIAKTP. . . . . . . . . . . . . AARWGEAEDLMGPAVFLA. SDASNFVNGH
Template Known Secondary structure  GGGT
SB

TT


T.............T
S
B
.SGGGTT

S
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   176...180.........190.........200.........210... ......220.........230. ........240.
 
   231......
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Query Sequence  VYNITNG
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Template Sequence  ILYVDGG
Template Known Secondary structure  STT
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   254.....260
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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