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Job DescriptionP75821
Confidence100.00%DateThu Jan 5 12:14:34 GMT 2012
Rank31Aligned Residues301
% Identity15%Templatec3a1nB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:ndp-sugar epimerase; PDBTitle: crystal structure of l-threonine dehydrogenase from2 hyperthermophilic archaeon thermoplasma volcanium
Resolution2.07 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  VLVTGATSGLGRNAVEFLCQKGISVRATGRNEAMGKLLEKMGAEFVPADLTELVSSQAKVMLAGIDTLWHCSSFTSPWGT
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Template Sequence  ILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRD. . . TGGIKFITLDVSNRDEIDRAVEKYSIDAIFHLAGILSAKGE
Template Known Secondary structure  TTTS
GGGSS


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   2.......10.........20.........30....... ..40.........50.........60.........70........
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  QQAFDLANVRATRRLGEWAVAWGVRNFIHISSPSLYFDYHHHRDIKEDFRPHRFANEFARSKAASEEVINMLSQANPQTR
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Template Sequence  KDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETPKNKVPSITITRPRTMYGVTKIAAELLGQYYYEKFGLD
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TT

GGG

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   7980.........90.........100.........110.........120.........130.........140.........150........
 
   163......170....... ..180.........190.........200.........210.........220.........230......
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Query Sequence  FTILRPQSLFGPHDK. . . . . . VFIPRLAHMMHHYGSILLPHGGSALVDMTYYENAVHAMWLASQEACDKLPSGRVYNITN
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Template Sequence  VRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEADRDKLVLRNGYNVTA
Template Known Secondary structure 

SSS




TTTTT
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TT

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   159160.........170.........180.........190.........200.........210.........220.........230........
 
   237..240.........250.........260.........270.........280.........290.........300.........310......
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Query Sequence  GEHRTLRSIVQKLIDELNIDCRIRSVPYPMLDMIARSMERLGRKSAKEPPLTHYGVSKLNFDFTLDITRAQEELGYQPVI
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Template Sequence  . YTFTPSELYSKIKERIPEFEIEYKEDFRDKIAA. . . . . . . . . . . . . . . . . . . . . . . . . TWPESLDSSEASNEWGFSIEY
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TT
TT



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B





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   239240.........250.........260.........270. ........280.........290..
 
   317..320.........330..
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Query Sequence  TLDEGIEKTAAWLRDH
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Template Sequence  DLDRTIDDMIDHISEK
Template Known Secondary structure 
T
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   293......300........
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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