Job Description P75821 Confidence 99.92% Date Thu Jan 5 12:14:34 GMT 2012 Rank 70 Aligned Residues 205 % Identity 20% Template c2zklA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:capsular polysaccharide synthesis enzyme cap5f; PDBTitle: crystal structure of capsular polysaccharide assembling protein capf2 from staphylococcus aureus Resolution 2.61 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	V	L	V	T	G	A	T	S	G	L	G	R	N	A	V	E	F	L	C	Q	K	G	I	S	V	R	A	T	G	R	N	E	A	M	G	K	L	L	E	K	M	G	A	E	F	V	P	A	D	L	T	E	L	V	S	S	Q	A	K	V	M	L	A	G	I	D	T	L	W	H	C	S	S	F	T	S	P	W
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.												.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.												.	.	.	.
Template Sequence		M	N	I	V	I	T	G	A	K	G	F	V	G	K	N	L	K	A	D	L	T	S	T	T	D	H	H	I	F	E	V	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	Q	T	K	E	E	E	L	E	S	A	L	L	.	.	K	A	D	F	I	V	H	L	A	G	V	.	.	.	.
Template Known Secondary structure								T	T	T	S																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T												.	.			S									.	.	.	.
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.												.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.																			.	.	.	.	.	.	.	40	.	.	.	.	.			.	.	.	.	50	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	Q	Q	A	F	D	L	A	N	V	R	A	T	R	R	L	G	E	W	A	V	A	W	G	V	R	N	F	I	H	I	S	S	P	S	L	Y	F	D	Y	H	H	H	R	D	I	K	E	D	F	R	P	H	R	F	A	N	E	F	A	R	S	K	A	A	S	E	E	V	I	N	M	L	S	Q	A	N	P	Q
Query Conservation
Alig confidence		.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Template Conservation		.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Template Sequence		.	.	.	.	.	F	S	L	G	N	V	S	Y	L	D	H	V	L	D	I	L	T	R	N	T	K	K	P	A	I	L	L	S	S	S	I	Q	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	Q	D	N	P	Y	G	E	S	K	L	Q	G	E	Q	L	L	R	E	Y	A	E	E	Y	G	.
Template Known Secondary structure		.	.	.	.	.			S	S													T	T		S	S										G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S		S																						.
Template Predicted Secondary structure		.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Template SS confidence
							65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.																	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.					.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.
Query SS confidence																		.	.	.	.
Query Sequence		T	R	F	T	I	L	R	P	Q	S	L	F	G	P	H	D	.	.	.	.	K	V	F	I	P	R	L	A	H	M	M	H	H	Y	G	S	I	L	L	P	H	G	G	S	A	L	V	D	M	T	Y	Y	E	N	A	V	H	A	M	W	L	A	S	Q	E	A	C	D	K	L	P	S	G	R	V	Y	N	I	T	N
Query Conservation																		.	.	.	.
Alig confidence																		.	.	.	.																				.																																	.	.
Template Conservation																																									.																																	.	.
Template Sequence		N	T	V	Y	I	Y	R	W	P	N	L	F	G	K	W	C	K	P	N	Y	N	S	V	I	A	T	F	C	Y	K	I	A	R	N	E	E	I	Q	V	.	N	D	R	N	V	E	L	T	L	N	Y	V	D	D	I	V	A	E	I	K	R	A	I	E	G	T	P	T	I	E	N	G	.	.	V	P	T	V	P	N
Template Known Secondary structure															T	T			T	T	T	T											T	T	T						.	S		T	T																			T	T	T						T	T	.	.					S
Template Predicted Secondary structure																																									.																																	.	.
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.			.	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	H	R	T	L	R	S	I	V	Q	K	L	I	D	E	L	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	F	K	V	T	L	G	E	I	V	D	L	L	Y	K	F	K	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions