Job Description P75821 Confidence 99.97% Date Thu Jan 5 12:14:34 GMT 2012 Rank 59 Aligned Residues 297 % Identity 13% Template c2x86K_ PDB info PDB header:isomerase Chain: K: PDB Molecule:adp-l-glycero-d-manno-heptose-6-epimerase; PDBTitle: agme bound to adp-b-mannose Resolution 2.80 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																																				.
Query SS confidence																																																																				.
Query Sequence		V	L	V	T	G	A	T	S	G	L	G	R	N	A	V	E	F	L	C	Q	K	G	I	S	V	R	A	T	G	R	N	E	A	M	G	K	L	L	E	K	M	G	A	E	F	V	P	A	D	L	T	E	L	V	S	S	Q	A	K	V	M	L	A	G	I	D	.	T	L	W	H	C	S	S	F	T	S	P	W	G
Query Conservation																																																																				.
Alig confidence																																											.																									.
Template Conservation																																											.
Template Sequence		I	I	V	T	G	G	A	G	F	I	G	S	N	I	V	K	A	L	N	D	K	G	I	T	D	I	L	V	V	D	N	L	K	D	G	T	K	F	V	N	L	.	V	D	L	N	I	A	D	Y	M	D	K	E	D	F	L	I	Q	I	M	A	G	E	E	F	G	D	V	E	A	I	F	H	E	G	A	C	S	S
Template Known Secondary structure						T	T	T	S													T	T											S	S	G	G	G	G				.		T	S			S															T				S	S									S
Template Predicted Secondary structure																																											.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Q	Q	A	F	D	L	A	N	V	R	A	T	R	R	L	G	E	W	A	V	A	W	G	V	R	N	F	I	H	I	S	S	P	S	L	Y	F	D	Y	H	H	H	R	D	I	K	E	D	F	R	P	H	R	F	A	N	E	F	A	R	S	K	A	A	S	E	E	V	I	N	M	L	S	Q	A	N	P	Q	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	T	E	W	D	G	K	Y	M	M	D	N	N	Y	Q	Y	S	K	E	L	L	H	Y	C	L	E	R	E	I	P	F	L	Y	A	S	S	A	A	T	Y	G	G	R	T	S	D	F	I	E	S	R	E	Y	E	K	P	L	N	V	F	G	Y	S	K	F	L	F	D	E	Y	V	R	Q	I	L	P	E	A	N	S
Template Known Secondary structure		T	T											T															T									G	G	G	G		S		S	S				S	S	G	G	G				S	S																	G	G	G		S	S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.								.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.
Query Sequence		R	F	T	I	L	R	P	Q	S	L	F	G	P	H	D	K	V	F	I	P	R	.	.	.	.	.	.	.	L	A	H	M	M	H	H	Y	G	S	I	L	L	P	H	G	G	S	A	L	V	D	M	T	Y	Y	E	N	A	V	H	A	M	W	L	A	S	Q	E	A	C	D	K	L	P	S	G	R	V	Y	N	I
Query Conservation																							.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.																																												.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.
Template Sequence		Q	I	V	G	F	R	Y	F	N	V	Y	G	P	R	E	G	H	K	G	S	M	A	S	V	A	F	H	L	N	T	Q	L	N	N	G	E	S	P	K	L	F	E	G	S	E	N	F	K	R	D	F	V	Y	V	G	D	V	A	D	V	N	L	W	F	L	E	N	G	V	S	G	.	.	.	.	.	I	F	N	L
Template Known Secondary structure													S	S	S		G	G	G	G	G	G	S												T	T							T	T	G	G	G																										.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.						.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	N	G	E	H	R	T	L	R	S	I	V	Q	K	L	I	D	E	L	N	I	D	C	R	I	R	S	V	P	Y	P	M	L	D	M	I	A	R	S	M	E	R	L	G	R	K	S	A	K	E	P	P	L	T	H	Y	G	V	S	K	L	N	F	D	F	T	L	D	I	T	R	A	Q	E	E	L	G	Y	Q	P
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	T	G	R	A	E	S	F	Q	A	V	A	D	A	T	L	A	Y	H	K	K	G	Q	I	E	Y	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	F	P	D	K	L	K	G	R	Y	Q	A	F	T	Q	A	D	L	T	N	L	R	A	A	G	Y	D	K	P
Template Known Secondary structure		S		S																	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				G	G	G	T	T	T			S	B											T	T
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.																									.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	T	L	D	E	G	I	E	K	T	A	A	W	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	K	T	V	A	E	G	V	T	E	Y	M	A	W	L
Template Known Secondary structure																T
Template Predicted Secondary structure
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions