Job Description P75821 Confidence 100.00% Date Thu Jan 5 12:14:34 GMT 2012 Rank 15 Aligned Residues 292 % Identity 18% Template c2q1wC_ PDB info PDB header:sugar binding protein Chain: C: PDB Molecule:putative nucleotide sugar epimerase/ dehydratase; PDBTitle: crystal structure of the bordetella bronchiseptica enzyme wbmh in2 complex with nad+ Resolution 2.19 Å

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		1	.		.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40			.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure				.																																							.	.
Query SS confidence				.																																							.	.
Query Sequence		M	K	.	V	L	V	T	G	A	T	S	G	L	G	R	N	A	V	E	F	L	C	Q	K	G	I	S	V	R	A	T	G	R	N	E	A	M	G	K	L	L	.	.	E	K	M	G	A	E	F	V	P	A	D	L	T	E	L	V	S	S	Q	A	K	V	M	L	A	G	I	D	T	L	W	H	C	S	S	F	T
Query Conservation				.																																							.	.
Alig confidence				.																																							.	.
Template Conservation
Template Sequence		M	K	K	V	F	I	T	G	I	C	G	Q	I	G	S	H	I	A	E	L	L	L	E	R	G	D	K	V	V	G	I	D	N	F	A	T	G	R	R	E	H	L	K	D	H	P	N	L	T	F	V	E	G	S	I	A	D	H	A	L	V	N	Q	L	I	G	D	L	Q	P	D	A	V	V	H	T	A	A	S	Y
Template Known Secondary structure									T	T	T	S													T	T										S	S			G	G	G	S				T	T								T	T															S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	P	W	G	T	Q	Q	A	F	D	L	A	N	V	R	A	T	R	R	L	G	E	W	A	V	A	W	G	V	R	N	F	I	H	I	S	S	P	S	L	Y	F	D	Y	H	H	H	R	D	I	K	E	D	F	R	P	H	R	F	A	N	E	F	A	R	S	K	A	A	S	E	E	V	I	N	M	L	S	Q	A
Query Conservation
Alig confidence																																																																															.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		K	D	P	D	D	W	Y	N	D	T	L	T	N	C	V	G	G	S	N	V	V	Q	A	A	K	K	N	N	V	G	R	F	V	Y	F	Q	T	A	L	C	Y	G	V	K	P	I	Q	Q	P	V	R	L	D	H	P	R	N	P	A	N	S	S	Y	A	I	S	K	S	A	N	E	D	Y	L	E	Y	S	.	.	.
Template Known Secondary structure		S		T	T										T													T	T		S								G	G	G	G		S	S		S	S	S	S	B		T	T						T	T																		.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	P	Q	T	R	F	T	I	L	R	P	Q	S	L	F	G	P	H	D	K	V	F	I	P	R	L	A	H	M	M	H	H	Y	G	S	I	L	L	P	H	G	G	S	A	L	V	D	M	T	Y	Y	E	N	A	V	H	A	M	W	L	A	S	Q	E	A	C	D	K	L	P	S	G	R	V	Y	N	I	T	N	G
Query Conservation
Alig confidence		.	.																																						.	.	.																											.	.	.	.	.
Template Conservation		.	.																																						.	.	.																											.	.	.	.	.
Template Sequence		.	.	G	L	D	F	V	T	F	R	L	A	N	V	V	G	P	R	N	S	G	P	L	P	I	F	F	Q	R	L	S	E	G	K	K	C	F	V	T	.	.	.	K	A	R	R	D	F	V	F	V	K	D	L	A	R	A	T	V	R	A	V	D	G	V	G	H	G	.	.	.	.	.	A	Y	H	F	S	S	G
Template Known Secondary structure		.	.										S				S	T	T														T	T							.	.	.	S																				T	T					.	.	.	.	.					S		S
Template Predicted Secondary structure		.	.																																						.	.	.																											.	.	.	.	.
Template SS confidence
				158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.				.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220						.	.	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	H	R	T	L	R	S	I	V	Q	K	L	I	D	E	L	N	I	D	C	R	I	R	S	V	P	Y	P	M	L	D	M	I	A	R	S	M	E	R	L	G	R	K	S	A	K	E	P	P	L	T	H	Y	G	V	S	K	L	N	F	D	F	T	L	D	I	T	R	A	Q	E	E	L	G	Y	Q	P	V	I	T
Query Conservation
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	D	V	A	I	K	E	L	Y	D	A	V	V	E	A	M	A	L	P	S	Y	P	E	P	E	I	R	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	A	P	S	I	L	L	D	P	S	R	T	I	Q	D	F	G	K	I	E	F	T	P
Template Known Secondary structure																		T		S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					B			B											S
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.																													.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	E	G	I	E	K	T	A	A	W	L	R	D	H	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K	E	T	V	A	A	A	V	A	Y	F	R	E	Y	G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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