Job Description P75821 Confidence 100.00% Date Thu Jan 5 12:14:34 GMT 2012 Rank 13 Aligned Residues 291 % Identity 15% Template c2pzlB_ PDB info PDB header:sugar binding protein Chain: B: PDB Molecule:putative nucleotide sugar epimerase/ dehydratase; PDBTitle: crystal structure of the bordetella bronchiseptica enzyme2 wbmg in complex with nad and udp Resolution 2.39 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40			.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.
Query SS confidence																																										.	.
Query Sequence		M	K	V	L	V	T	G	A	T	S	G	L	G	R	N	A	V	E	F	L	C	Q	K	G	I	S	V	R	A	T	G	R	N	E	A	M	G	K	L	L	.	.	E	K	M	G	A	E	F	V	P	A	D	L	T	E	L	V	S	S	Q	A	K	V	M	L	A	G	I	D	T	L	W	H	C	S	S	F	T	S
Query Conservation																																										.	.
Alig confidence																																										.	.
Template Conservation
Template Sequence		M	R	I	L	I	T	G	G	A	G	C	L	G	S	N	L	I	E	H	W	L	P	Q	G	H	E	I	L	V	I	D	N	F	A	T	G	K	R	E	V	L	P	P	V	A	G	L	S	V	I	E	G	S	V	T	D	A	G	L	L	E	R	A	F	D	S	F	K	P	T	H	V	V	H	S	A	A	A	Y	K
Template Known Secondary structure								T	T	T	S											G	G	G	T										S	S	S		G	G	G	S		S		T	T								T	T															S										S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	W	G	T	Q	Q	A	F	D	L	A	N	V	R	A	T	R	R	L	G	E	W	A	V	A	W	G	V	R	N	F	I	H	I	S	S	P	S	L	Y	F	D	Y	H	H	H	R	D	I	K	E	D	F	R	P	H	R	F	A	N	E	F	A	R	S	K	A	A	S	E	E	V	I	N	M	L	S	Q	A	N
Query Conservation
Alig confidence																																																	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.
Template Sequence		D	P	D	D	W	A	E	D	A	A	T	N	V	Q	G	S	I	N	V	A	K	A	A	S	K	A	G	V	K	R	L	L	N	F	Q	T	A	L	C	Y	G	R	P	A	T	V	P	.	.	.	.	.	.	.	I	P	I	D	S	P	T	A	P	F	T	S	Y	G	I	S	K	T	A	G	E	A	F	L	M	M
Template Known Secondary structure			T	T										T													T	T		S								G	G	G	G		S		S	S	S	S	.	.	.	.	.	.	.	B		T	T	S						S														T	T
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.								.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Q	T	R	F	T	I	L	R	P	Q	S	L	F	G	P	H	D	K	V	F	I	P	R	L	A	H	M	M	H	H	Y	G	S	I	L	L	P	H	G	G	S	A	L	V	D	M	T	Y	Y	E	N	A	V	H	A	M	W	L	A	S	Q	E	A	C	D	K	L	P	S	G	R	V	Y	N	I	T	N	G	E
Query Conservation
Alig confidence																																						.	.																															.	.	.	.
Template Conservation																																						.	.																															.	.	.	.
Template Sequence		S	D	V	P	V	V	S	L	R	L	A	N	V	T	G	P	R	L	A	I	G	P	I	P	T	F	Y	K	R	L	K	A	G	Q	K	C	.	.	F	C	S	D	T	V	R	D	F	L	D	M	S	D	F	L	A	I	A	D	L	S	L	Q	E	G	R	P	T	G	.	.	.	.	V	F	N	V	S	T	G	E
Template Known Secondary structure			S	S													T	T			S	S											T	T				.	.				S																			T	S	T	T					.	.	.	.					S		S
Template Predicted Secondary structure																																						.	.																															.	.	.	.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.			190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.					220	.	.	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	R	T	L	R	S	I	V	Q	K	L	I	D	E	L	N	I	D	C	R	I	R	S	V	P	Y	P	M	L	D	M	I	A	R	S	M	E	R	L	G	R	K	S	A	K	E	P	P	L	T	H	Y	G	V	S	K	L	N	F	D	F	T	L	D	I	T	R	A	Q	E	E	L	G	Y	Q	P	V	I	T	L
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	H	S	I	K	E	V	F	D	V	V	L	D	Y	V	G	A	P	V	P	V	V	A	P	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	D	V	P	S	V	V	L	D	P	S	K	T	E	T	E	F	G	W	K	A	K	V	D	F
Template Known Secondary structure																	T										T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S		S	B			B															S
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.																														.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	G	I	E	K	T	A	A	W	L	R	D	H	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	D	T	I	T	G	Q	L	A	W	Y	D	K	Y	G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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