Return to main results Retrieve Phyre Job Id

Job DescriptionP75821
Confidence99.93%DateThu Jan 5 12:14:34 GMT 2012
Rank69Aligned Residues238
% Identity11%Templatec2gn9B_
PDB info PDB header:lyaseChain: B: PDB Molecule:udp-glcnac c6 dehydratase; PDBTitle: crystal structure of udp-glcnac inverting 4,6-dehydratase in complex2 with nadp and udp-glc
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20... ......30.........40.. .......50.........60.........70.....
Predicted Secondary structure 




..




....














Query SS confidence 





















. .


















. . . .
































Query Sequence  KVLVTGATSGLGRNAVEFLCQK. . GISVRATGRNEAMGKLLEK. . . . MGAEFVPADLTELVSSQAKVMLAGIDTLWHCSS
Query Conservation 











  
   

  ..
  
    
          ....  
  
  

 
                   
 
Alig confidence 





















..


















....



















..










Template Conservation   







 


 

  
     
  
    
                   
  

 
        ..         

Template Sequence  TILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYAL. . EGVDICIHAAA
Template Known Secondary structure  TTTSSB
SS
S

TT

TT
T..TT
S


Template Predicted Secondary structure 





























..




Template SS confidence 















































































   12.......20.........30.........40.........50.........60.........70........ .80.........
 
   76...80.........90.........100.........110.........120.........130.........140.........150.....
Predicted Secondary structure 
























































Query SS confidence 















































































Query Sequence  FTSPWGTQQAFDLANVRATRRLGEWAVAWGVRNFIHISSPSLYFDYHHHRDIKEDFRPHRFANEFARSKAASEEVINMLS
Query Conservation                                                                                  
Alig confidence 













































...........






















Template Conservation                       
  
  
         
  

    ...........                       
Template Sequence  LKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAA. . . . . . . . . . . NPINLYGATKLCSDKLFVSANNF
Template Known Secondary structure 


STT
S

GGGS...........S

SGGG
Template Predicted Secondary structure 

















...........





Template SS confidence 















































































   90.........100.........110.........120.........130..... ....140.........150........
 
   156...160.........170.........180.........190.........200.........210.........220.........230.....
Predicted Secondary structure 






































Query SS confidence 















































































Query Sequence  QANPQTRFTILRPQSLFGPHDKVFIPRLAHMMHHYGSILLPHGGSALVDMTYYENAVHAMWLASQEACDKLPSGRVYNIT
Query Conservation                   
                                
 
 
 
                       
Alig confidence 


















.


















































.....



Template Conservation           


   


 .                       
   
  
 
 
 
 
   
        .....    
Template Sequence  KGSSQTQFSVVRYGNVVGS. RGSVVPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKSLKRMHGGE. . . . . IFVP
Template Known Secondary structure 
SSS




SS
.TT
STTT

S



S
SS



SS
.....
Template Predicted Secondary structure 





.
















.....
Template SS confidence 















































































   159160.........170....... ..180.........190.........200.........210.........220........ .230..
 
   236...240.........250........
Predicted Secondary structure 








Query SS confidence 






















Query Sequence  NGEHRTLRSIVQKLIDELNIDCR
Query Conservation       
  
         
    
Alig confidence 






















Template Conservation       
  
 
  
         
Template Sequence  KIPSMKMTDLAKALAPNTPTKII
Template Known Secondary structure 


S
SSS




Template Predicted Secondary structure 







Template SS confidence 






















   233......240.........250.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions