Phyre 2 alignment of P75821 with c2exxB

Job Description P75821
Confidence 99.90% Date Thu Jan 5 12:14:34 GMT 2012

Rank 72 Aligned Residues 272

% Identity 18% Template c2exxB_

PDB info PDB header:unknown function Chain: B: PDB Molecule:hscarg protein; PDBTitle: crystal structure of hscarg from homo sapiens in complex with nadp

Resolution 2.40 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.			40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.																.	.
Query SS confidence																								.																.	.
Query Sequence	K	V	L	V	T	G	A	T	S	G	L	G	R	N	A	V	E	F	L	C	Q	K	G	.	I	S	V	R	A	T	G	R	N	E	A	M	G	K	L	.	.	L	E	K	M	G	A	E	F	V	P	A	D	L	T	E	L	V	S	S	Q	A	K	V	M	L	A	G	I	D	T	L	W	H	C	S	S	F	T	S
Query Conservation																								.																.	.
Alig confidence																								.																.	.																								.	.
Template Conservation																																																																	.	.
Template Sequence	L	V	V	V	F	G	G	T	G	A	Q	G	G	S	V	A	R	T	L	L	E	D	G	T	F	K	V	R	V	V	T	R	N	P	R	K	K	A	A	K	E	L	R	L	Q	G	A	E	V	V	Q	G	D	Q	D	D	Q	V	I	M	E	L	A	L	.	.	N	G	A	Y	A	T	F	I	V	T	N	Y	W	E
Template Known Secondary structure						T	T	T	S															S	S							S	S	T	T	S									T	T								S	S										.	.	T	T		S								S	S	S
Template Predicted Secondary structure																																																																	.	.
Template SS confidence
	6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.			70	.	.	.	.	.	.	.	.	.	80	.	.	.

	79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	P	W	G	T	Q	Q	A	F	D	L	A	N	V	R	A	T	R	R	L	G	E	W	A	V	A	W	G	V	R	N	F	I	H	I	S	S	P	S	L	Y	F	D	Y	H	H	H	R	D	I	K	E	D	F	R	P	H	R	F	A	N	E	F	A	R	S	K	A	A	S	E	E	V	I	N	M	L	S	Q	A	N
Query Conservation
Alig confidence		.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.
Template Conservation		.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.
Template Sequence	S	.	.	.	.	.	C	S	Q	E	Q	E	V	K	Q	G	K	L	L	A	D	L	A	R	R	L	G	L	H	Y	V	V	Y	S	G	L	E	N	I	.	.	.	.	.	.	.	.	.	.	.	K	K	L	T	A	G	R	L	A	A	A	H	F	D	G	K	G	E	V	E	E	Y	F	R	D	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	S																			T	T													.	.	.	.	.	.	.	.	.	.	.									T	T																.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.
Template SS confidence
	84						.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.												.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.

	159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	P	Q	T	R	F	T	I	L	R	P	Q	S	L	F	G	P	H	D	K	V	F	I	P	R	L	A	H	M	M	H	H	Y	G	S	I	L	L	P	H	G	G	S	A	L	V	D	M	T	Y	Y	E	N	A	V	H	A	M	W	L	A	S	Q	E	A	C	D	K	L	P	S	G	R	V	Y	N	I	T	N	G	E
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.																																.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.																																.	.	.
Template Sequence	I	G	V	P	M	T	S	V	R	L	P	C	Y	F	E	N	L	L	S	H	F	L	P	Q	K	A	P	D	.	.	.	.	.	.	.	.	.	G	K	S	Y	L	V	P	M	D	G	M	S	V	S	D	L	G	P	V	V	L	S	L	L	K	M	P	E	K	Y	V	.	.	.	G	Q	N	I	G	L	S	T	C
Template Known Secondary structure		T												G	G	G	G	T	T	T	T			B	T	T	T	T	.	.	.	.	.	.	.	.	.													G	G	G																T	.	.	.	T							S
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.																																.	.	.
Template SS confidence
	143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170										.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.				.	.	.	.	.	.	.	.	210

	239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	H	R	T	L	R	S	I	V	Q	K	L	I	D	E	L	N	I	D	C	R	I	R	S	V	P	Y	P	M	L	D	M	I	A	R	S	M	E	R	L	G	R	K	S	A	K	E	P	P	L	T	H	Y	G	V	S	K	L	N	F	D	F	T	L	D	I	T	R	A	Q	E	E	L	G	Y	Q	P	V	I	T	L
Query Conservation
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.						.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.						.
Template Sequence	R	H	T	A	E	E	Y	A	A	L	L	T	K	H	T	R	K	V	V	H	D	A	K	M	T	P	E	D	Y	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	D	L	A	N	M	F	R	F	Y	A	L	R	P	D	R	D	I	E	L	T	L	R	.	L	N	P	K	A	.	L	T	L
Template Known Secondary structure																T	S									T	T	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T												.			T	T		.
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.						.
Template SS confidence
	218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.																		.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270		.	.	.	.	.		.	.	.

	319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	D	E	G	I	E	K	T	A	A	W	L	R	D	H	G	K
Query Conservation
Alig confidence			.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.
Template Sequence	D	Q	.	.	.	.	.	.	.	W	L	E	Q	H	K	G
Template Known Secondary structure			.	.	.	.	.	.	.				T	T	G	G
Template Predicted Secondary structure			.	.	.	.	.	.	.
Template SS confidence
	286	.								.	.	290	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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