Job Description P75821 Confidence 100.00% Date Thu Jan 5 12:14:34 GMT 2012 Rank 2 Aligned Residues 320 % Identity 17% Template c1z7eC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:protein arna; PDBTitle: crystal structure of full length arna Resolution 3.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.									.
Query SS confidence																										.									.
Query Sequence		M	K	V	L	V	T	G	A	T	S	G	L	G	R	N	A	V	E	F	L	C	Q	K	G	.	I	S	V	R	A	T	G	R	.	N	E	A	M	G	K	L	L	E	K	M	G	A	E	F	V	P	A	D	L	T	E	L	V	S	S	Q	A	K	V	M	L	A	G	I	D	T	L	W	H	C	S	S	F	T	S
Query Conservation																										.									.
Alig confidence																										.									.																																	.
Template Conservation																																																																				.
Template Sequence		T	R	V	L	I	L	G	V	N	G	F	I	G	N	H	L	T	E	R	L	L	R	E	D	H	Y	E	V	Y	G	L	D	I	G	S	D	A	I	S	R	F	L	N	H	P	H	F	H	F	V	E	G	D	I	S	I	H	S	E	W	I	E	Y	H	V	K	.	K	C	D	V	V	L	P	L	V	A	I	A	T
Template Known Secondary structure								T	T	T	S													S	S	S								S			T	T	T	G	G	G	T	T		T	T								T	T	T											.			S
Template Predicted Secondary structure																																																																				.
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.		.	.	.	.	.	.	.	.	390	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.								.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.
Query Sequence		P	W	G	T	Q	Q	A	F	D	L	A	N	V	R	A	T	R	R	L	G	E	W	A	V	A	W	G	V	R	N	F	I	H	I	S	S	P	S	L	Y	F	D	Y	H	H	H	R	D	I	K	E	D	F	R	P	H	R	.	.	.	.	.	.	.	F	A	N	E	F	A	R	S	K	A	A	S	E	E	V	I
Query Conservation																																																											.	.	.	.	.	.	.
Alig confidence																																																											.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	I	E	Y	T	R	N	P	L	R	V	F	E	L	D	F	E	E	N	L	R	I	I	R	Y	C	V	K	Y	R	K	R	I	I	F	P	S	T	S	E	V	Y	G	M	C	S	D	K	Y	F	D	E	D	H	S	N	L	I	V	G	P	V	N	K	P	R	W	I	Y	S	V	S	K	Q	L	L	D	R	V	I
Template Known Secondary structure		T						S									T													T	T									G	G	G	G	B	T			S	S	S	B		T	T	T				B				T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.											.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.
Query Sequence		N	M	L	S	Q	A	N	P	Q	T	R	F	T	I	L	R	P	Q	S	L	F	G	P	H	D	K	V	.	.	.	.	.	.	.	.	.	.	F	I	P	R	L	A	H	M	M	H	H	Y	G	S	I	L	L	P	H	G	G	S	A	L	V	D	M	T	Y	Y	E	N	A	V	H	A	M	W	L	A	S	Q	E
Query Conservation																													.	.	.	.	.	.	.	.	.	.
Alig confidence									.																				.	.	.	.	.	.	.	.	.	.
Template Conservation									.
Template Sequence		W	A	Y	G	E	K	E	.	G	L	Q	F	T	L	F	R	P	F	N	W	M	G	P	R	L	D	N	L	N	A	A	R	I	G	S	S	R	A	I	T	Q	L	I	L	N	L	V	E	G	S	P	I	K	L	I	D	G	G	K	Q	K	R	C	F	T	D	I	R	D	G	I	E	A	L	Y	R	I	I	E	N
Template Known Secondary structure									.											S			S	T	T	S	S						T	T	T		S													T							G	G	G																						T
Template Predicted Secondary structure									.
Template SS confidence
		475	.	.	.	.	480	.		.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		A	C	D	K	L	P	S	G	R	V	Y	N	I	T	N	G	E	H	.	R	T	L	R	S	I	V	Q	K	L	I	D	E	L	N	I	D	C	R	I	R	S	V	P	Y	P	M	L	D	M	I	A	R	S	M	E	R	L	G	R	K	S	A	K	E	P	P	L	T	H	Y	G	V	S	K	L	N	F	D	F	T
Query Conservation																				.
Alig confidence			.																	.																																																.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.																																																																	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	.	G	N	R	C	D	G	E	I	I	N	I	G	N	P	E	N	E	A	S	I	E	E	L	G	E	M	L	L	A	S	F	E	K	H	P	L	R	H	H	F	P	P	F	A	G	F	R	V	V	E	S	S	S	Y	Y	G	K	G	Y	Q	D	V	E	H	.	.	.	.	.	.	.	.	.	.	.	.	R	K
Template Known Secondary structure		G	.	G	G	T	T	T	T								G	G	G																			T	T	G	G	G	S											T						T	T					S		.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure			.																																																																	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		554		.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.													.	620
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	I	T	R	A	Q	E	E	L	G	Y	Q	P	V	I	T	L	D	E	G	I	E	K	T	A	A	W	L	R	D	H	G	K	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	S	I	R	N	A	H	R	C	L	D	W	E	P	K	I	D	M	Q	E	T	I	D	E	T	L	D	F	F	L	R	T	V	D	L
Template Known Secondary structure		B															S															T	T	S
Template Predicted Secondary structure
Template SS confidence
		621	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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