Job Description P42615 Confidence 3.51% Date Thu Jan 5 12:01:49 GMT 2012 Rank 86 Aligned Residues 89 % Identity 13% Template c3aqpB_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:probable secdf protein-export membrane protein; PDBTitle: crystal structure of secdf, a translocon-associated membrane protein,2 from thermus thrmophilus Resolution 3.30 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.										.	30	.	.						.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.					.	.	.	.	.																.							.
Query SS confidence																										.	.	.	.	.	.	.	.	.					.	.	.	.	.																.							.
Query Sequence		R	M	S	L	R	Q	L	A	W	S	G	A	V	L	L	L	V	G	T	L	L	L	A	W	.	.	.	.	.	.	.	.	.	S	A	V	R	.	.	.	.	.	Q	Q	E	S	T	L	A	I	R	A	V	H	Q	G	T	.	T	M	P	D	G	F	.	S	I	W	H	H	L	D	A	H	G	I	P	F	K	S
Query Conservation																										.	.	.	.	.	.	.	.	.					.	.	.	.	.																.							.
Alig confidence			.	.	.																					.	.	.	.	.	.	.	.	.					.	.	.	.	.																.							.
Template Conservation			.	.	.
Template Sequence		R	.	.	.	K	N	L	T	S	L	F	L	L	G	V	F	L	L	A	L	L	F	V	W	K	P	W	A	P	E	E	P	K	V	R	L	G	L	D	L	K	G	G	L	R	I	V	L	E	A	D	V	E	N	P	T	L	D	D	L	E	K	A	R	T	V	L	E	N	R	I	N	A	L	G	V	A	E	P	L
Template Known Secondary structure			.	.	.																						S	S		S					S				S	T	T	T											S	S	S																							S	S
Template Predicted Secondary structure			.	.	.
Template SS confidence
		3				.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		69	70	.	.	.	.	.		.	.	.	.	80	.			.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure									.							.	.
Query SS confidence									.							.	.
Query Sequence		I	T	P	K	N	D	T	.	L	L	I	T	F	D	.	.	S	S	D	Q	S	A	A	A	K	A	V	L	D	R	T
Query Conservation									.							.	.
Alig confidence									.							.	.
Template Conservation
Template Sequence		I	Q	I	Q	G	Q	K	R	I	V	V	E	L	P	G	L	S	Q	A	D	Q	D	R	A	L	K	L	I	G	Q	R
Template Known Secondary structure						T	T	T																							S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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