Return to main results Retrieve Phyre Job Id

Job DescriptionP42615
Confidence53.83%DateThu Jan 5 12:01:49 GMT 2012
Rank2Aligned Residues42
% Identity10%Templatec3aqoD_
PDB info PDB header:membrane proteinChain: D: PDB Molecule:probable secdf protein-export membrane protein; PDBTitle: structure and function of a membrane component secdf that enhances2 protein export
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   55....60.........70..... ....80.... .....90......
Predicted Secondary structure 









.

..
Query SS confidence 




















.








. .











Query Sequence  IWHHLDAHGIPFKSITPKNDT. LLITFDSSD. . QSAAAKAVLDRT
Query Conservation 
 
 
   

  



    
.
 


 
 
.. 

 




   
Alig confidence 




















.








..











Template Conservation 
  


  



  
   
   
 





   
      

   
Template Sequence  LENRINALGVAEPLIQIQGQKRIVVELPGLSQADQDRALKLIGQR
Template Known Secondary structure  TT
SS
TTT



T

Template Predicted Secondary structure 


















Template SS confidence 












































   66...70.........80.........90.........100.........110
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions