Job Description P42615 Confidence 6.54% Date Thu Jan 5 12:01:49 GMT 2012 Rank 53 Aligned Residues 85 % Identity 14% Template c1oy8A_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:acriflavine resistance protein b; PDBTitle: structural basis of multiple drug binding capacity of the acrb2 multidrug efflux pump Resolution 3.63 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.							.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.						.	.	.	.	.	.	60	.					.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.																			.	.	.	.	.									.	.	.	.
Query SS confidence																							.	.	.	.	.	.																			.	.	.	.	.									.	.	.	.
Query Sequence		G	A	V	L	L	L	V	G	T	L	L	L	A	W	S	A	V	R	Q	Q	E	.	.	.	.	.	.	S	T	L	A	I	R	A	V	H	Q	G	T	T	M	P	D	G	F	.	.	.	.	.	S	I	W	H	H	L	D	A	.	.	.	.	H	G	I	P	F	K	S	I	T	P	K	N	D	T	L	L	I	T
Query Conservation																							.	.	.	.	.	.																			.	.	.	.	.									.	.	.	.
Alig confidence																							.	.	.	.	.	.																			.	.	.	.	.									.	.	.	.
Template Conservation
Template Sequence		V	I	A	I	I	I	M	L	A	G	G	L	A	I	L	K	L	P	V	A	Q	Y	P	T	I	A	P	P	A	V	T	I	S	A	S	Y	P	G	A	D	A	K	T	V	Q	D	T	V	T	Q	V	I	E	Q	N	M	N	G	I	D	N	L	M	Y	M	S	S	N	S	D	S	T	G	T	V	Q	I	T	L	T
Template Known Secondary structure																T	T	S				S	S				S											T	T										T							T					S	S										T	T	S
Template Predicted Secondary structure
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	D	S	S	D	Q	S	A	A	A	K	A	V	L	D	R	T	L	P	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	E	S	G	T	D	A	D	I	A	Q	V	Q	V	Q	N	K	L	Q	L
Template Known Secondary structure				T	T															T	T
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions