Return to main results Retrieve Phyre Job Id

Job DescriptionO52982
Confidence24.46%DateThu Jan 5 10:56:32 GMT 2012
Rank3Aligned Residues40
% Identity18%Templatec3d12E_
PDB info PDB header:hydrolase/membrane proteinChain: E: PDB Molecule:ephrin-b3; PDBTitle: crystal structures of nipah virus g attachment glycoprotein in complex2 with its receptor ephrin-b3
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   75....80 .........90 .........100.........110....
Predicted Secondary structure 





...



..




Query SS confidence 





. . .









. .























Query Sequence  SPDGCE. . . GGSYYYLVDM. . EEKTVQPLMNALCIADNIKLEYHE
Query Conservation 





... 





 

..








 







 
    
Alig confidence 





...









..























Template Conservation   
 
 

 

  

 



 
   

    

 
 
  


 
 
Template Sequence  NLWGHEFRSHHDYYIIATSDGTREGLESLQGGVCLTRGMKVLLRV
Template Known Secondary structure 
SS




TT

S
BSSSTTS

BSST


Template Predicted Secondary structure 



























Template SS confidence 












































   123......130.........140.........150.........160.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions