Job Description O52982 Confidence 2.37% Date Thu Jan 5 10:56:32 GMT 2012 Rank 97 Aligned Residues 40 % Identity 18% Template c2r5kE_ PDB info PDB header:viral protein Chain: E: PDB Molecule:major capsid protein l1; PDBTitle: pentamer structure of major capsid protein l1 of human2 papilloma virus type 11 Resolution 3.20 Å

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	T	P	P	R	F	S	D	V	V	S	R	Q	D	D	V	S	E	E	W	S	Q	V	G	F	S	S	G	L	T	L	Q	V	L	R	T	R	E	S	P	D	G	C	E	G	G	S	Y	Y	Y	L	V	D	M	E	E	K
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	L	S	A	E	V	M	A	Y	I	H	T	M	N	P	S	V	L	E	D	W	N	K	Q	D	P	Y	K	D	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	F	W	E	V	N	L	K	E	K
Template Known Secondary structure																											T	T	S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								G	G	G
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		378	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.																			.	.	410	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions