Job Description P77315 Confidence 97.05% Date Thu Jan 5 12:27:38 GMT 2012 Rank 2 Aligned Residues 292 % Identity 14% Template d1l7va_ SCOP info ABC transporter involved in vitamin B12 uptake, BtuC ABC transporter involved in vitamin B12 uptake, BtuC ABC transporter involved in vitamin B12 uptake, BtuC Resolution 3.20

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.												.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.
Query Sequence		V	S	L	K	Q	F	V	S	R	H	I	N	E	I	G	L	L	V	V	I	A	I	L	Y	L	V	F	S	L	N	A	P	.	.	.	.	.	.	.	.	.	.	.	G	F	I	S	L	N	N	Q	M	N	V	L	R	D	A	A	T	I	G	I	A	A	W	A	M	T	L	I	I	I	S	.	.	.	.	.	.
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.
Template Conservation
Template Sequence		T	L	A	R	Q	Q	Q	R	Q	N	I	R	W	L	L	C	L	S	V	L	X	L	L	A	L	L	L	S	L	C	A	G	E	Q	W	I	S	P	G	D	W	F	T	P	R	G	E	L	F	V	W	Q	I	R	L	P	R	T	L	A	V	L	L	V	G	A	A	L	A	I	S	G	A	V	X	Q	A	L	F	E
Template Known Secondary structure																																B	S	S	S	B			S	G	G	G	S	S	T	T	T	T	T					T																											T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
						77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.			.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure		.	.	.	.																																																											.	.
Query SS confidence		.	.	.	.																																																											.	.
Query Sequence		.	.	.	.	G	E	I	D	V	S	V	G	P	M	V	A	F	V	S	V	C	L	A	F	L	L	Q	F	E	V	P	L	A	V	A	C	L	L	V	L	L	L	G	A	L	M	G	T	L	A	G	V	L	R	G	V	F	N	V	P	S	F	.	.	V	A	T	L	G	L	W	S	A	L	R	G	M	G	L	F
Query Conservation		.	.	.	.																																																											.	.
Alig confidence		.	.	.	.																																																											.	.
Template Conservation
Template Sequence		N	P	L	A	E	P	G	L	L	G	V	S	N	G	A	G	V	G	L	I	A	A	V	L	L	G	Q	G	Q	L	P	N	W	A	L	G	L	C	A	I	A	G	A	L	I	I	T	L	I	L	L	R	F	A	R	R	H	L	S	T	S	R	L	L	L	A	G	V	A	L	G	I	I	C	S	A	L	X	T	W
Template Known Secondary structure			T	T			T	T	T	T	T															T	S		T	T																												T
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		M	T	N	A	L	P	V	P	I	D	E	N	E	V	L	D	W	L	G	G	Q	F	L	G	V	P	V	S	A	L	I	M	I	V	L	F	A	L	F	V	F	I	S	R	K	T	A	F	G	R	S	V	F	A	V	G	G	N	A	T	A	A	Q	L	C	G	I	N	V	R	R	V	R	I	L	I	F	T	L	S
Query Conservation
Alig confidence																																																.	.	.
Template Conservation																																																.	.	.
Template Sequence		A	I	Y	F	S	T	S	V	D	L	R	Q	L	X	Y	W	X	X	G	G	F	G	G	V	D	W	R	Q	S	W	L	X	L	A	L	I	P	V	L	L	W	I	C	C	Q	S	.	.	.	R	P	X	N	X	L	A	L	G	E	I	S	A	R	Q	L	G	L	P	L	W	F	W	R	N	V	L	V	A	A	T
Template Known Secondary structure																			T				T	T			G	G	G																			.	.	.																T	T
Template Predicted Secondary structure																																																.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.				.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		231	.	.	.	.	.	.	.	.	240	.			.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.					.	300	.	.	.	.
Predicted Secondary structure													.	.																																																										.	.	.	.
Query SS confidence													.	.																																																										.	.	.	.
Query Sequence		G	L	L	A	A	V	T	G	I	L	L	.	.	A	A	R	L	G	S	G	N	A	G	A	A	N	G	L	E	F	D	V	I	A	A	V	V	V	G	G	T	A	L	S	G	G	R	G	S	L	F	G	T	L	L	G	V	L	V	I	T	L	I	G	N	G	L	V	L	L	.	.	.	.	G	I	N	S	F	F
Query Conservation													.	.																																																										.	.	.	.
Alig confidence													.	.																										.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	W	X	V	G	V	S	V	A	L	A	G	A	I	G	F	I	G	L	V	I	P	H	I	L	R	L	C	G	L	T	D	H	R	V	L	L	P	.	.	.	.	.	.	.	.	.	.	.	.	G	C	A	L	A	G	A	S	A	L	L	L	A	D	I	V	A	R	L	A	L	A	A	A	E	L	P	I	G	V
Template Known Secondary structure																	S	S	S	S									T	T			S							.	.	.	.	.	.	.	.	.	.	.	.																				S		S	S	S
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.													.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	V	V	R	G	V	I	I	V	V	A	V	L	A	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	T	A	T	L	G	A	P	V	F	I	W	L	L	L	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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