Job Description P77315 Confidence 6.26% Date Thu Jan 5 12:27:38 GMT 2012 Rank 17 Aligned Residues 187 % Identity 11% Template c3hd6A_ PDB info PDB header:membrane protein, transport protein Chain: A: PDB Molecule:ammonium transporter rh type c; PDBTitle: crystal structure of the human rhesus glycoprotein rhcg Resolution 2.10 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.						.	.	.	.	.	80	.	.	.
Predicted Secondary structure																																																																				.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.
Query Sequence		P	Q	G	K	S	V	S	L	K	Q	F	V	S	R	H	I	N	E	I	G	L	L	V	V	I	A	I	L	Y	L	V	F	S	L	N	A	P	G	F	I	S	L	N	N	Q	M	N	V	L	R	D	A	A	T	I	G	I	A	A	W	A	M	T	L	I	I	.	.	.	.	.	I	S	G	E	I	D	V	S	V
Query Conservation																																																																				.	.	.	.	.
Alig confidence																																																																				.	.	.	.	.
Template Conservation
Template Sequence		R	N	L	E	Q	S	K	E	R	Q	N	S	V	Y	Q	S	D	L	F	A	M	I	G	T	L	F	L	W	M	Y	W	P	S	F	N	S	A	I	S	Y	H	G	D	S	Q	H	R	A	A	I	N	T	Y	C	S	L	A	A	C	V	L	T	S	V	A	I	S	S	A	L	H	K	K	G	K	L	D	M	V	H
Template Known Secondary structure		T	T	G	G	G	G	T	T	T	S	S																								T	T	T	T		S	S																													T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
		84	.	.	.	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.					.	.	.	.	.	130	.	.	.	.				.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure														.																														.	.	.	.											.	.	.
Query SS confidence														.																														.	.	.	.											.	.	.
Query Sequence		G	P	M	V	A	F	V	S	V	C	L	A	.	F	L	L	Q	F	E	V	P	L	A	V	A	C	L	L	V	L	L	L	G	A	L	M	G	T	L	A	G	V	.	.	.	.	L	R	G	V	F	N	V	P	S	F	.	.	.	V	A	T	L	G	L	W	S	A	L	R	G	M	G	L	F	M	T	N	A	L
Query Conservation														.																														.	.	.	.											.	.	.
Alig confidence														.																														.	.	.	.											.	.	.
Template Conservation
Template Sequence		I	Q	N	A	T	L	A	G	G	V	A	V	G	T	A	A	E	M	M	L	M	P	Y	G	A	L	I	I	G	F	V	C	G	I	I	S	T	L	G	F	V	Y	L	T	P	F	L	E	S	R	L	H	I	Q	D	T	C	G	I	N	N	L	H	G	I	P	G	I	I	G	G	I	V	G	A	V	T	A	A	S
Template Known Secondary structure					G	G	G						T	T	T	T	T	T	T		S																																				T	T						T
Template Predicted Secondary structure
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	P	I	D	E	N	E	V	L	D	W	L	G	G	Q	F	L	G	V	P	V	S	A	L	I	M	I	V	L	F	A	L	F	V	F	I	S	R	K	T	A	F	G	R
Query Conservation
Alig confidence															.	.	.	.	.
Template Conservation															.	.	.	.	.
Template Sequence		D	W	T	A	R	T	Q	G	K	F	Q	I	Y	.	.	.	.	.	G	L	L	V	T	L	A	M	A	L	M	G	G	I	I	V	G	L	I	L	R	L	P	F	W	G	Q
Template Known Secondary structure															.	.	.	.	.																					T	S	T	T	S
Template Predicted Secondary structure															.	.	.	.	.
Template SS confidence
		384	.	.	.	.	.	390	.	.	.	.	.	.						.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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