 |
Job Description | P0A6J8 | Confidence | 89.94% | Date | Thu Jan 5 11:03:18 GMT 2012 |
Rank | 240 | Aligned Residues | 40 |
% Identity | 13% | Template | d1neka2 |
SCOP info | FAD/NAD(P)-binding domain
| FAD/NAD(P)-binding domain
| Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
|
Resolution | 2.60 |
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | E | K | L | R | V | G | I | V | F | G | G | K | S | A | E | H | E | V | S | L | Q | S | A | K | N | I | V | D | A | I | D | K | S | R | F | D | V | V | L | L | G | I | D | K | Q | G | Q | W |
Query Conservation |   |
|   |
|   |   |
|   |
|
|   |
|
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |
|
|   |   |   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|   |
|
|   |   |
|
|   |   |
|   |   |
|   |
|
|
|   |   |   |   |   |
|
|
Template Sequence |   |
V | R | E | F | D | A | V | V | I | G | A | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
G | A | G | M | R | A | A | L | Q | I | S | Q | S | G | Q | T | C | A | L | L | S | K | V | F | P | T | R | S |
Template Known Secondary structure |   |
 |  |  |  | S |
|  |  |  |
|
| S | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|  |  |  |
| S | S |
| G | G | G | S |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|