Job Description P0A6J8 Confidence 100.00% Date Thu Jan 5 11:03:18 GMT 2012 Rank 36 Aligned Residues 283 % Identity 20% Template c3orqA_ PDB info PDB header:ligase,biosynthetic protein Chain: A: PDB Molecule:n5-carboxyaminoimidazole ribonucleotide synthetase; PDBTitle: crystal structure of n5-carboxyaminoimidazole synthetase from2 staphylococcus aureus complexed with adp Resolution 2.23 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	V	G	I	V	F	G	G	K	S	A	E	H	E	V	S	L	Q	S	A	K	N	I	V	D	A	I	D	K	S	R	F	D	V	V	L	L	G	I	D	K	Q	G	Q	W	H	V	S	D	A	S	N	Y	L	L	N	A	D	D	P	A	H	I	A	L	R	P	S	A	T	S	L	A	Q	V	P	G	K	H
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	T	I	G	I	I	G	G	G	.	.	.	.	.	.	.	.	.	Q	L	G	K	X	X	A	Q	S	A	Q	K	X	G	Y	K	V	V	V	L	D	P	S	E	D	C	P	C	R	Y	V	A	H	E	F	I	Q	A	K	Y	D	D	E	K	A	L	N	Q	L	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										S	.	.	.	.	.	.	.	.	.													T	T								S		T	T		T	T	G	G	G	S	S							T	T									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.										.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	H	Q	L	I	D	A	Q	N	G	Q	P	L	P	T	V	D	V	I	F	P	I	V	H	G	T	L	G	E	D	G	S	L	Q	G	M	L	R	V	A	N	L	P	F	V	G	S	D	V	L	A	S	A	A	C	M	D	K	D	V	T	K	R	L	L	R	D	A	G	L	N	I	A	P	F	I	T	L	T	R
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	G	Q	K	C	D	V	I	T	Y	E	F	.	.	.	.	.	E	N	I	S	A	Q	Q	L	K	L	L	C	E	K	Y	N	I	P	Q	G	Y	Q	A	I	Q	L	L	Q	D	R	L	T	E	K	E	T	L	K	S	A	G	T	K	V	V	P	F	I	S	V	K	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.					S					S	S	.	.	.	.	.	T	T	S												S			T	T	T	T								S											T	T			B								S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.
Template SS confidence
														68	.	70	.	.	.	.	.	.	.	.						.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.			.	.	.	.	.	240
Predicted Secondary structure																																																																	.									.	.
Query SS confidence																																																																	.									.	.
Query Sequence		A	N	R	H	N	I	S	F	A	E	V	E	S	K	L	G	L	P	L	F	V	K	P	A	N	Q	G	S	S	V	G	V	S	K	V	T	S	E	E	Q	Y	A	I	A	V	D	L	A	F	E	F	D	H	K	V	I	V	E	Q	G	I	K	G	.	R	E	I	E	C	A	V	L	.	.	G	N	D	N	P	Q
Query Conservation																																																																	.									.	.
Alig confidence					.	.	.	.																																									.																.									.	.
Template Conservation					.	.	.	.																																									.
Template Sequence		S	T	D	.	.	.	.	I	D	K	A	I	E	T	L	G	Y	P	F	I	V	K	T	R	F	G	G	Y	D	G	K	G	Q	V	L	I	N	N	E	K	D	L	Q	E	G	F	K	.	L	I	E	T	S	E	C	V	A	E	K	Y	L	N	I	K	K	E	V	S	L	T	V	T	R	G	N	N	N	Q	I	T
Template Known Secondary structure		S	T		.	.	.	.								T		S	S						S	S	S			T	T	T	T						S	T	T	S							.			T	T	S																						G	G	G
Template Predicted Secondary structure					.	.	.	.																																									.
Template SS confidence
		131	.	.					.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.		.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	T	C	G	E	I	V	L	T	S	D	F	Y	A	Y	D	T	K	Y	I	D	E	D	G	A	K	V	V	V	P	A	A	I	A	P	E	I	N	D	K	I	R	A	I	A	V	Q	A	Y	Q	T	L	G	C	A	G	M	A	R	V	D	V	F	L	T	P	E	N	E	V	V	I	N	E	I	N	T	L	P
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.	.													.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.													.	.
Template Sequence		F	F	P	L	Q	E	N	E	H	R	N	Q	I	L	.	.	.	.	.	.	.	.	.	.	.	F	K	T	I	V	P	A	R	I	D	K	T	.	.	A	E	A	K	E	Q	V	N	K	I	I	Q	S	I	H	F	I	G	T	F	T	V	E	F	F	I	D	S	N	N	Q	L	Y	V	N	E	I	A	P	R	P
Template Known Secondary structure												T	T			.	.	.	.	.	.	.	.	.	.	.						S		S	S				.	.												T	T	S														T	T										S	S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.													.	.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.												220	.	.	.	.	.	.	.	.	.	230	.			.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	T	N	I	S	M	Y	P	K	L	W	Q	A	S	G	L	G	Y	T	D	L	I	T	R	L	I
Query Conservation
Alig confidence											.	.	.	.
Template Conservation											.	.	.	.
Template Sequence		H	N	S	G	H	Y	S	I	E	.	.	.	.	A	C	D	Y	S	Q	F	D	T	H	I	L	A	V
Template Known Secondary structure			G	G	G	T	T				.	.	.	.		B	S	S
Template Predicted Secondary structure											.	.	.	.
Template SS confidence
		273	.	.	.	.	.	.	280	.					.	.	.	.	.	.	.	.	290	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions