Job Description P0A6J8 Confidence 100.00% Date Thu Jan 5 11:03:18 GMT 2012 Rank 26 Aligned Residues 296 % Identity 17% Template c3n6rK_ PDB info PDB header:ligase Chain: K: PDB Molecule:propionyl-coa carboxylase, alpha subunit; PDBTitle: crystal structure of the holoenzyme of propionyl-coa carboxylase (pcc) Resolution 3.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	E	K	L	R	V	G	I	V	F	G	G	K	S	A	E	H	E	V	S	L	Q	S	A	K	N	I	V	D	A	I	D	K	S	R	F	D	V	V	L	L	G	I	D	K	Q	G	Q	W	H	V	S	D	A	S	N	Y	L	L	N	A	D	D	P	A	H	I	A	L	R	P	S	A	T	S	L	A	Q	V	P
Query Conservation
Alig confidence					.	.								.	.	.	.	.	.	.	.	.
Template Conservation					.	.								.	.	.	.	.	.	.	.	.
Template Sequence		F	N	K	.	.	I	L	I	A	N	R	G	.	.	.	.	.	.	.	.	.	E	I	A	C	R	V	I	K	T	A	R	K	M	G	I	S	T	V	A	I	Y	S	D	A	D	K	Q	A	L	H	V	Q	M	A	D	E	A	V	H	I	G	P	P	P	A	N	Q	S	Y	I	V	I	D	K	V	M	A	A	I
Template Known Secondary structure					.	.	B		B	S				.	.	.	.	.	.	.	.	.											G	G	G	S			B						S	T	T	S	S							S	S						S	S	S	S	G	G	G	T	T	S
Template Predicted Secondary structure					.	.								.	.	.	.	.	.	.	.	.
Template SS confidence
		63	.	.			.	.	.	.	70	.	.										.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		G	K	H	E	H	Q	L	I	D	A	Q	N	G	Q	P	L	P	T	V	D	V	I	F	P	I	V	H	G	T	L	G	E	D	G	S	L	Q	G	M	L	R	V	A	N	L	P	F	V	G	S	D	V	L	A	S	A	A	C	M	D	K	D	V	T	K	R	L	L	R	D	A	G	L	N	I	A	P	F	I	.
Query Conservation																																																																																	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.									.																																																					.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template Sequence		R	A	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	Q	A	V	H	P	G	Y	.	G	F	L	S	E	N	S	K	F	A	E	A	L	E	A	E	G	V	I	F	V	G	P	P	K	G	A	I	E	A	M	G	D	K	I	T	S	K	K	I	A	Q	E	A	N	V	S	T	V	P	G	Y	M
Template Known Secondary structure				T		.	.	.	.	.	.	.	.	.	.	.	.	.	.		S			B			S	.	S	S	S	T	T										T	T	T				S	S	S								T	T	S										T	T	T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template SS confidence
		132	.	.	.															.	.	.	.	140	.	.	.		.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
			160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure		.																																																																				.
Query SS confidence		.																																																																				.
Query Sequence		.	T	L	T	R	A	N	R	H	N	I	S	F	A	E	V	E	S	K	L	G	L	P	L	F	V	K	P	A	N	Q	G	S	S	V	G	V	S	K	V	T	S	E	E	Q	Y	A	I	A	V	D	L	A	F	E	F	D	H	K	V	I	V	E	Q	G	I	K	G	.	R	E	I	E	C	A	V	L	G	N	D
Query Conservation		.																																																																				.
Alig confidence		.								.	.	.	.																	.	.	.	.	.	.																				.	.														.
Template Conservation										.	.	.	.																	.	.	.	.	.	.																				.	.
Template Sequence		G	L	I	E	D	A	D	E	.	.	.	.	A	V	K	I	S	N	Q	I	G	Y	P	V	M	I	K	A	.	.	.	.	.	.	S	A	M	R	I	A	W	N	D	Q	E	A	R	E	G	F	Q	S	S	.	.	K	N	D	R	I	F	I	E	K	F	V	T	Q	P	R	H	I	E	I	Q	V	L	C	D	S
Template Known Secondary structure						S				.	.	.	.										S	S						.	.	.	.	.	.						B		S												.	.	T											S	S												T
Template Predicted Secondary structure										.	.	.	.																	.	.	.	.	.	.																				.	.
Template SS confidence
		197	.	.	200	.	.	.	.					.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220							.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.			240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.		.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure																																					.
Query SS confidence																																					.
Query Sequence		N	P	Q	A	S	T	C	G	E	I	V	L	T	S	D	F	Y	A	Y	D	T	K	Y	I	D	E	D	G	A	K	V	V	V	P	A	.	A	I	A	P	E	I	N	D	K	I	R	A	I	A	V	Q	A	Y	Q	T	L	G	C	A	G	M	A	R	V	D	V	F	L	T	P	E	N	E	V	V	I	N	E	I
Query Conservation																																					.
Alig confidence																	.	.	.	.	.	.	.	.													.
Template Conservation																	.	.	.	.	.	.	.	.
Template Sequence		H	G	N	G	I	Y	L	G	E	R	E	C	S	I	Q	.	.	.	.	.	.	.	.	R	R	N	Q	K	V	V	E	E	A	P	S	P	F	L	D	E	A	T	R	R	A	M	G	E	Q	A	V	A	L	A	K	A	V	G	Y	A	S	A	G	T	V	E	F	I	V	D	G	Q	K	N	F	Y	F	L	E	M
Template Known Secondary structure		T	S														.	.	.	.	.	.	.	.		T	T								S		S	S																			T	T	T			S										T	T	S
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.
Template SS confidence
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.									.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	T	L	P	G	F	T	N	I	S	M	Y	P	K	L	W	Q	A	S	G	L	G	Y	T	D	L	I	T	R	L
Query Conservation
Alig confidence									.	.	.	.
Template Conservation									.	.	.	.
Template Sequence		N	T	R	L	Q	V	E	.	.	.	.	H	P	V	T	E	L	I	T	G	V	D	L	V	E	Q	M	I	R	V
Template Known Secondary structure				S			T	T	.	.	.	.									T
Template Predicted Secondary structure									.	.	.	.
Template SS confidence
		351	.	.	.	.	.	.					.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions