Job Description P0A6J8 Confidence 100.00% Date Thu Jan 5 11:03:18 GMT 2012 Rank 16 Aligned Residues 305 % Identity 18% Template c3bg5C_ PDB info PDB header:ligase Chain: C: PDB Molecule:pyruvate carboxylase; PDBTitle: crystal structure of staphylococcus aureus pyruvate2 carboxylase Resolution 2.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																				.
Query SS confidence																																																																				.
Query Sequence		M	E	K	L	R	V	G	I	V	F	G	G	K	S	A	E	H	E	V	S	L	Q	S	A	K	N	I	V	D	A	I	D	K	S	R	F	D	V	V	L	L	G	I	D	K	Q	G	Q	W	H	V	S	D	A	S	N	Y	L	L	N	A	D	D	P	A	H	.	I	A	L	R	P	S	A	T	S	L	A	Q	V
Query Conservation																																																																				.
Alig confidence					.	.								.	.	.	.	.	.	.	.	.																																														.
Template Conservation					.	.								.	.	.	.	.	.	.	.	.
Template Sequence		I	K	K	.	.	L	L	V	A	N	R	G	.	.	.	.	.	.	.	.	.	E	I	A	I	R	I	F	R	A	A	A	E	L	D	I	S	T	V	A	I	Y	S	N	E	D	K	S	S	L	H	R	Y	K	A	D	E	S	Y	L	V	G	S	D	L	G	P	A	E	S	Y	L	N	I	E	R	I	I	D	V
Template Known Secondary structure					.	.				S				.	.	.	.	.	.	.	.	.													T	T									S	T	T	T	T		G	G	G	G	S	S	S							S	S			S	S	S	T	T	T
Template Predicted Secondary structure					.	.								.	.	.	.	.	.	.	.	.
Template SS confidence
		37	.	.			40	.	.	.	.	.	.										.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		P	G	K	H	E	H	Q	L	I	D	A	Q	N	G	Q	P	L	P	T	V	D	V	I	F	P	I	V	H	G	T	L	G	E	D	G	S	L	Q	G	M	L	R	V	A	N	L	P	F	V	G	S	D	V	L	A	S	A	A	C	M	D	K	D	V	T	K	R	L	L	R	D	A	G	L	N	I	A	P	.	.
Query Conservation																																																																																.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.									.																																																			.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template Sequence		A	K	Q	A	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	A	I	H	P	G	Y	.	G	F	L	S	E	N	E	Q	F	A	R	R	C	A	E	E	G	I	K	F	I	G	P	H	L	E	H	L	D	M	F	G	D	K	V	K	A	R	T	T	A	I	K	A	D	L	P	V	I	P	G	T
Template Known Secondary structure				T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.								S	.	S	S	S	T	T											T	T				S	S	S									S	S											T	T			B
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template SS confidence
		106	.	.	.	110															.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.							.	.	.	220	.	.	.	.	.	.		.	.	.	230
Predicted Secondary structure																																																													.	.	.	.	.	.											.
Query SS confidence																																																													.	.	.	.	.	.											.
Query Sequence		F	I	T	L	T	R	A	N	R	H	N	I	S	F	A	E	V	E	S	K	L	G	L	P	L	F	V	K	P	A	N	Q	G	S	S	V	G	V	S	K	V	T	S	E	E	Q	Y	A	I	A	V	D	L	A	F	E	F	D	H	.	.	.	.	.	.	K	V	I	V	E	Q	G	I	K	G	.	R	E	I	E
Query Conservation																																																													.	.	.	.	.	.											.
Alig confidence											.	.	.	.																																															.	.	.	.	.	.											.
Template Conservation											.	.	.	.
Template Sequence		D	G	P	I	K	S	Y	E	L	.	.	.	.	A	K	E	F	A	E	E	A	G	F	P	L	M	I	K	A	T	S	G	G	G	G	K	G	M	R	I	V	R	E	E	S	E	L	E	D	A	F	H	R	A	K	S	E	A	E	K	S	F	G	N	S	E	V	Y	I	E	R	Y	I	D	N	P	K	H	I	E
Template Known Secondary structure		S	S				T	T			.	.	.	.							S	S		S							S	S				G	G	G						S	T	T	T																S	S											S	S
Template Predicted Secondary structure											.	.	.	.
Template SS confidence
		171	.	.	.	.	.	.	.	.					180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.		.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		C	A	V	L	G	N	D	N	P	Q	A	S	T	C	G	E	I	V	L	T	S	D	F	Y	A	Y	D	T	K	Y	I	D	E	D	G	A	K	V	V	V	P	A	.	A	I	A	P	E	I	N	D	K	I	R	A	I	A	V	Q	A	Y	Q	T	L	G	C	A	G	M	A	R	V	D	V	F	L	T	P	E	N
Query Conservation																																												.
Alig confidence																								.	.	.	.	.	.	.	.													.
Template Conservation																								.	.	.	.	.	.	.	.
Template Sequence		V	Q	V	I	G	D	E	H	G	N	I	V	H	L	F	E	R	D	C	S	V	Q	.	.	.	.	.	.	.	.	R	R	H	Q	K	V	V	E	V	A	P	S	V	G	L	S	P	T	L	R	Q	R	I	C	D	A	A	I	Q	L	M	E	N	I	K	Y	V	N	A	G	T	V	E	F	L	V	S	G	D	E
Template Known Secondary structure								T	T	S														.	.	.	.	.	.	.	.	S	S	S								S		S	S																				T	T													T	T
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.									.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	V	I	N	E	I	N	T	L	P	G	F	T	N	I	S	M	Y	P	K	L	W	Q	A	S	G	L	G	Y	T	D	L	I	T	R	L	I	E	L	A	L
Query Conservation
Alig confidence		.														.	.	.	.																.	.	.
Template Conservation		.														.	.	.	.																.	.	.
Template Sequence		.	F	F	F	I	E	V	N	P	R	V	Q	V	E	.	.	.	.	H	T	I	T	E	M	V	T	G	I	D	I	V	K	T	.	.	.	Q	I	L	V	A	A
Template Known Secondary structure		.									S			T	T	.	.	.	.																.	.	.
Template Predicted Secondary structure		.														.	.	.	.																.	.	.
Template SS confidence
			320	.	.	.	.	.	.	.	.	.	330	.	.					.	.	.	.	.	.	.	340	.	.	.	.	.	.	.				.	.	350	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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