 |
Job Description | P0A6J8 | Confidence | 91.21% | Date | Thu Jan 5 11:03:18 GMT 2012 |
Rank | 195 | Aligned Residues | 67 |
% Identity | 13% | Template | c2v3aA_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:rubredoxin reductase; |
PDBTitle: crystal structure of rubredoxin reductase from pseudomonas2 aeruginosa.
|
Resolution | 2.4 Å |
|
 |
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | |
|
. | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . |
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | L | R | V | G | I | V | F | G | G | K | S | A | E | H | E | V | S | L | Q | S | A | K | N | I | V | D | A | I | D | K | S | R | . |
. |
F | D | V | V | L | L | G | I | D | K | Q | G | Q | W | H | V | S | D | A | S | N | Y | L | L | N | A | D | D | P | A | H | I | A | L | R | P | S | A | T | S | L | A | Q |
Query Conservation |   |
|   |   |
|   |
|
|   |
|
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |
|
|   |   |   |
| . | . |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |   |
|
|
|   |
|
|   |   |
|   |   |   |
|   |   |   |   |
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
R | A | P | L | V | I | I | G | T | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
L | A | G | Y | N | L | A | R | E | W | R | K | L | D | G | E | T | P | L | L | M | I | T | A | D | D | G | R | S | Y | S | K | P | M | L | S | T | G | F | S | K | N | K | D | A | D | G | L | A | M | A | E | P | G | A | M | A | E | Q |
Template Known Secondary structure |   |
|
|
|  |  |  |  |
|
| S | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S | S | S |
|  |  |  |  |
| S | S |
|
|
|  |  |
| G | G | G | G | G | G | T | T | T | T | T |
|
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
4 | . | . | . | . | . | 10 | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|