Job Description P0A6J8 Confidence 99.98% Date Thu Jan 5 11:03:18 GMT 2012 Rank 46 Aligned Residues 302 % Identity 17% Template c2r85B_ PDB info PDB header:unknown function Chain: B: PDB Molecule:purp protein pf1517; PDBTitle: crystal structure of purp from pyrococcus furiosus complexed with amp Resolution 1.70 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	R	V	G	I	V	F	G	G	K	S	A	E	H	E	V	S	L	Q	S	A	K	N	I	V	D	A	I	D	K	S	R	F	D	V	V	L	L	G	I	D	K	Q	G	Q	W	H	V	S	D	A	S	N	Y	L	L	N	A	D	D	P	A	H	I	A	L	R	P	S	A	T	S	L	A	Q	V	P	G	K
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.																																																				.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.																																																				.	.	.	.	.	.	.	.	.
Template Sequence		K	V	R	I	A	T	Y	A	S	H	.	.	.	.	.	.	.	.	.	.	S	A	L	Q	I	L	K	G	A	K	D	E	G	F	E	T	I	A	F	G	S	S	K	V	K	P	L	Y	T	K	Y	F	P	V	A	D	Y	F	I	E	E	K	Y	P	E	E	E	L	L	N	L	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									S	S	T	.	.	.	.	.	.	.	.	.	.	T											T	T							S		G	G	G						T	T	S				S					S	S									T	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.																																																				.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.											.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	E	H	Q	L	I	D	A	Q	N	G	Q	P	L	P	T	V	D	V	I	F	P	I	V	H	G	T	L	G	E	D	G	S	L	Q	G	M	L	R	V	A	N	L	P	F	V	G	S	D	V	L	A	S	A	A	C	M	D	K	D	V	T	K	R	L	L	R	D	A	G	L	N	I	A	P	F	I	T	L	T
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.																.																												.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.																.																												.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	A	V	V	V	P	T	G	S	F	V	A	H	L	G	.	.	I	E	L	V	E	N	M	K	V	P	Y	F	G	N	K	.	R	V	L	R	W	E	S	D	R	N	L	E	R	K	W	L	K	K	A	G	I	R	V	P	E	V	Y	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T							T	T							.	.						T		S	S		B	B	S		T	.	T							S											T	T						B		.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.																.																												.	.	.
Template SS confidence
																			63	.	.	.	.	.	.	70	.	.	.	.	.	.	.			.	.	80	.	.	.	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.						.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.																									.	.
Query SS confidence																																																			.	.	.	.	.																									.	.
Query Sequence		R	A	N	R	H	N	I	S	F	A	E	V	E	S	K	L	G	L	P	L	F	V	K	P	A	N	Q	G	S	S	V	G	V	S	K	V	T	S	E	E	Q	Y	A	I	A	V	D	L	A	.	.	.	.	.	F	E	F	D	H	K	V	I	V	E	Q	G	I	K	G	R	E	I	E	C	A	V	L	G	.	.
Query Conservation																																																			.	.	.	.	.																									.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.															.	.	.	.	.																					.	.	.	.	.																									.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.															.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	E	D	P	D	D	I	E	K	P	V	I	V	K	P	.	.	.	.	.	G	K	G	Y	F	L	A	K	D	P	E	D	F	W	R	K	A	E	K	F	L	G	I	K	R	K	E	D	L	K	N	I	Q	I	Q	E	Y	V	L	G	V	P	V	Y	P	H	Y	F	Y	S	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	S	S	G	G	G			S							.	.	.	.	.		T	T					S	S												T				S	S	T	T		S	S																				T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.															.	.	.	.	.
Template SS confidence
												120	.	.	.	.	.	.	.	.	.	130	.	.	.						.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
			236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.													.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.		.	.	.	.	.	.	300	.
Predicted Secondary structure		.																				.	.	.	.	.	.	.	.	.	.	.	.																																								.
Query SS confidence		.																				.	.	.	.	.	.	.	.	.	.	.	.																																								.
Query Sequence		.	N	D	N	P	Q	A	S	T	C	G	E	I	V	L	T	S	D	F	Y	.	.	.	.	.	.	.	.	.	.	.	.	A	Y	D	T	K	Y	I	D	E	D	G	A	K	V	V	V	P	A	A	I	A	P	E	I	N	D	K	I	R	A	I	A	V	Q	A	Y	Q	T	L	.	G	C	A	G	M	A	R	V
Query Conservation		.																				.	.	.	.	.	.	.	.	.	.	.	.																																								.
Alig confidence		.																				.	.	.	.	.	.	.	.	.	.	.	.																																								.
Template Conservation
Template Sequence		V	R	E	E	L	E	L	M	S	I	D	R	R	Y	E	S	N	V	D	A	I	G	R	I	P	A	K	D	Q	L	E	F	D	M	D	I	T	Y	T	V	I	G	N	I	P	I	V	L	R	E	S	L	L	M	D	V	I	E	A	G	E	R	V	V	K	A	A	E	E	L	M	G	G	L	W	G	P	F	C	L
Template Known Secondary structure		T	T	T															G	G	G	G	G	G	S							T	S																		G	G	G																			S	S
Template Predicted Secondary structure
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.						.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure																								.	.	.	.	.
Query SS confidence																								.	.	.	.	.
Query Sequence		D	V	F	L	T	P	E	N	E	V	V	I	N	E	I	N	T	L	P	G	F	T	.	.	.	.	.	N	I	S	M	Y	P	K	L	W	Q	A	S	G	L	G	Y	T	D	L	I	T	R	L	I	E	L	A	L	E	R	H	A	A	D	N	A	L	K
Query Conservation																								.	.	.	.	.
Alig confidence																								.	.	.	.	.
Template Conservation
Template Sequence		E	G	V	F	T	P	D	L	E	F	V	V	F	E	I	S	A	R	I	V	A	G	T	N	I	F	V	N	G	S	P	Y	T	W	L	R	Y	D	R	P	V	S	T	G	R	R	I	A	M	E	I	R	E	A	I	E	N	D	M	L	E	K	V	L	T
Template Known Secondary structure							T	T	S										S			G	G	G	G	G	G	T	T			T	T	G	G	G	T		S	S																		T	T						B
Template Predicted Secondary structure
Template SS confidence
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions