Job Description P0A6J8 Confidence 100.00% Date Thu Jan 5 11:03:18 GMT 2012 Rank 39 Aligned Residues 298 % Identity 17% Template c2qk4A_ PDB info PDB header:ligase Chain: A: PDB Molecule:trifunctional purine biosynthetic protein adenosine-3; PDBTitle: human glycinamide ribonucleotide synthetase Resolution 2.45 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.
Query SS confidence																																			.	.
Query Sequence		M	E	K	L	R	V	G	I	V	F	G	G	K	S	A	E	H	E	V	S	L	Q	S	A	K	N	I	V	D	A	I	D	K	.	.	S	R	F	D	V	V	L	L	G	I	D	K	Q	G	Q	W	H	V	S	D	A	S	N	Y	L	L	N	A	D	D	P	A	H	I	A	L	R	P	S	A	T	S	L	A	Q
Query Conservation																																			.	.
Alig confidence						.								.	.	.	.	.	.	.	.	.													.	.													.																									.	.	.	.	.	.	.	.
Template Conservation						.								.	.	.	.	.	.	.	.	.																											.																									.	.	.	.	.	.	.	.
Template Sequence		M	A	A	R	.	V	L	I	I	G	S	G	.	.	.	.	.	.	.	.	.	G	R	E	H	T	L	A	W	K	L	A	Q	S	H	H	V	K	Q	V	L	V	A	P	G	N	A	.	G	T	A	C	S	E	K	I	S	N	T	A	I	S	I	S	D	H	T	A	L	A	Q	F	.	.	.	.	.	.	.	.
Template Known Secondary structure			S			.							S	.	.	.	.	.	.	.	.	.											T	T		T	T											G	.	G	G	S	B	S	S	S								S	S									.	.	.	.	.	.	.	.
Template Predicted Secondary structure						.								.	.	.	.	.	.	.	.	.																											.																									.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.		.	.	.	.	.	10	.										.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	G	K	H	E	H	Q	L	I	D	A	Q	N	G	Q	P	L	P	T	V	D	V	I	F	P	I	V	H	G	T	L	G	E	D	G	S	L	Q	G	M	L	R	V	A	N	L	P	F	V	G	S	D	V	L	A	S	A	A	C	M	D	K	D	V	T	K	R	L	L	R	D	A	G	L	N	I	A	P	F
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	K	E	K	K	I	E	F	V	V	V	G	P	E	A	P	L	A	A	.	.	G	I	V	G	N	L	R	S	A	G	V	Q	C	F	G	P	T	A	E	A	A	Q	L	E	S	S	K	R	F	A	K	E	F	M	D	R	H	G	I	P	T	A	Q	W
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T								S	S					T	.	.	T								T	T					S			T	T	T	T					B											T	T			B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template SS confidence
																	62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80			.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	L	T	R	A	N	R	H	N	I	S	F	A	E	V	E	S	K	L	G	L	P	L	F	V	K	P	A	N	Q	G	S	S	V	G	V	S	K	V	T	S	E	E	Q	Y	A	I	A	V	D	L	A	F	E	F	D	H	K	V	I	V	E	Q	G	I	K	G	R	E	I	E	C	A	V	L	G	N	D	N
Query Conservation
Alig confidence										.	.	.	.																			.	.																					.
Template Conservation										.	.	.	.																			.	.																					.
Template Sequence		K	A	F	T	K	P	E	E	.	.	.	.	A	C	S	F	I	L	S	A	D	F	P	A	L	V	V	K	A	S	.	.	G	L	K	G	V	I	V	A	K	S	K	E	E	A	C	K	A	V	Q	E	.	I	M	Q	E	E	T	I	V	I	E	E	L	L	D	G	E	E	V	S	C	L	C	F	T	D	G	K
Template Known Secondary structure					S	S				.	.	.	.									S	S								S	.	.	B								S	S											.		T	T												S											S	S
Template Predicted Secondary structure										.	.	.	.																			.	.																					.
Template SS confidence
		125	.	.	.	.	130	.	.					.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150			.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170		.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.						.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.			.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure																																					.	.	.	.	.																							.	.
Query SS confidence																																					.	.	.	.	.																							.	.
Query Sequence		P	Q	A	S	T	C	G	E	I	V	L	T	S	D	F	Y	A	Y	D	T	K	Y	I	D	E	D	G	A	K	V	V	V	P	A	A	.	.	.	.	.	I	A	P	E	I	N	D	K	I	R	A	I	A	V	Q	A	Y	Q	T	L	G	C	.	.	A	G	M	A	R	V	D	V	F	L	T	P	E	N	E	V
Query Conservation																																					.	.	.	.	.																							.	.
Alig confidence																	.	.																			.	.	.	.	.																							.	.															.
Template Conservation																	.	.																																																														.
Template Sequence		T	V	A	P	M	P	P	A	Q	D	H	K	R	L	L	.	.	E	G	D	G	G	P	N	T	G	G	M	G	A	Y	C	P	A	P	Q	V	S	N	D	L	L	L	K	I	K	D	T	V	L	Q	R	T	V	D	G	M	Q	Q	E	G	T	P	Y	T	G	I	L	Y	A	G	I	M	L	T	K	N	G	.	P
Template Known Secondary structure									B								.	.	T	T	T													S		T	T													T											T	T															T	T		.
Template Predicted Secondary structure																	.	.																																																														.
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.			.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.		.
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	N	E	I	N	T	L	P	G	F	T	N	I	S	M	Y	P	K	L	W	Q	A	S	G	L	G	Y	T	D	L	I	T	R	L	I
Query Conservation
Alig confidence												.	.	.
Template Conservation												.	.	.
Template Sequence		K	V	L	E	F	N	C	R	F	G	.	.	.	D	P	E	C	Q	V	I	L	P	L	L	K	S	D	L	Y	E	V	I	Q	S	T	L
Template Known Secondary structure								S	S			.	.	.	T	T	T					G	G	G	B		S
Template Predicted Secondary structure												.	.	.
Template SS confidence
		285	.	.	.	.	290	.	.	.	.				.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions