Job Description P0A6J8 Confidence 99.92% Date Thu Jan 5 11:03:18 GMT 2012 Rank 66 Aligned Residues 240 % Identity 18% Template c2qf7A_ PDB info PDB header:ligase Chain: A: PDB Molecule:pyruvate carboxylase protein; PDBTitle: crystal structure of a complete multifunctional pyruvate carboxylase2 from rhizobium etli Resolution 2.00 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.								.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.	.
Query Sequence		L	R	V	G	I	V	F	G	G	K	S	A	E	H	E	V	S	L	Q	S	A	K	N	I	V	D	A	I	D	K	S	R	F	D	V	V	L	L	G	I	D	K	Q	G	Q	W	H	V	S	D	A	S	N	Y	L	L	N	A	D	D	P	.	.	.	.	.	.	.	A	H	I	A	L	R	P	S	A	T	S	L
Query Conservation																																																															.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.
Template Sequence		S	K	I	L	V	A	N	R	S	.	.	.	.	.	.	.	.	.	E	I	A	I	R	V	F	R	A	A	N	E	L	G	I	K	T	V	A	I	W	A	E	E	D	K	L	A	L	H	R	F	K	A	D	E	S	Y	Q	V	G	R	G	P	H	L	A	R	D	L	G	P	I	E	S	Y	L	S	I	D	E	V
Template Known Secondary structure											.	.	.	.	.	.	.	.	.													T	T									G	G	G	T	T						S	S	S	S					S		S	T	T	S	S	S				T	T
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.										.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	V	P	G	K	H	E	H	Q	L	I	D	A	Q	N	G	Q	P	L	P	T	V	D	V	I	F	P	I	V	H	G	T	L	G	E	D	G	S	L	Q	G	M	L	R	V	A	N	L	P	F	V	G	S	D	V	L	A	S	A	A	C	M	D	K	D	V	T	K	R	L	L	R	D	A	G	L	N	I	A
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template Sequence		I	R	V	A	K	L	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	A	I	H	P	G	Y	.	G	L	L	S	E	S	P	E	F	V	D	A	C	N	K	A	G	I	I	F	I	G	P	K	A	D	T	M	R	Q	L	G	N	K	V	A	A	R	N	L	A	I	S	V	G	V	P	V	V
Template Known Secondary structure									T	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S						S	.	S	T	T	T	T											T	T				S	S											S											T	T			B
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template SS confidence
		75	.	.	.	.	80	.	.															.	.	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																																																																							.
Query SS confidence																																																																							.
Query Sequence		P	F	I	T	L	T	R	A	N	R	H	N	I	S	F	A	E	V	E	S	K	L	G	L	P	L	F	V	K	P	A	N	Q	G	S	S	V	G	V	S	K	V	T	S	E	E	Q	Y	A	I	A	V	D	L	A	F	E	F	D	H	K	V	I	V	E	Q	G	I	K	.	G	R	E	I	E	C	A	V	L	G
Query Conservation																																																																							.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	L	V	E	R	A	R	H	V	E	S	Q	I	L	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																																																			209	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.		.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.		.	310	.	.	.
Predicted Secondary structure																																								.																																				.
Query SS confidence																																								.																																				.
Query Sequence		N	D	N	P	Q	A	S	T	C	G	E	I	V	L	T	S	D	F	Y	A	Y	D	T	K	Y	I	D	E	D	G	A	K	V	V	V	P	A	A	.	I	A	P	E	I	N	D	K	I	R	A	I	A	V	Q	A	Y	Q	T	L	G	C	A	G	M	A	R	V	D	V	F	L	T	P	E	.	N	E	V	V	I
Query Conservation																																								.																																				.
Alig confidence																			.	.	.	.	.	.	.	.														.																																				.
Template Conservation																			.	.	.	.	.	.	.	.
Template Sequence		D	T	H	G	N	V	V	H	L	F	E	R	D	C	S	V	Q	.	.	.	.	.	.	.	.	R	R	N	Q	K	V	V	E	R	A	P	A	P	Y	L	S	E	A	Q	R	Q	E	L	A	A	Y	S	L	K	I	A	G	A	T	N	Y	I	G	A	G	T	V	E	Y	L	M	D	A	D	T	G	K	F	Y	F
Template Known Secondary structure			T	T	S														.	.	.	.	.	.	.	.		T	T								S		T	T																				T	T													T	T	T	T
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240									.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.			.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure																							.	.
Query SS confidence																							.	.
Query Sequence		N	E	I	N	T	L	P	G	F	T	N	I	S	M	Y	P	K	L	W	Q	A	.	.	S	G	L	G	Y	T	D	L	I	T	R	L
Query Conservation																							.	.
Alig confidence									.	.	.	.	.	.									.	.
Template Conservation									.	.	.	.	.	.
Template Sequence		I	E	V	N	P	R	I	.	.	.	.	.	.	Q	V	E	H	T	V	T	E	V	V	T	G	I	D	I	V	K	A	Q	I	H	I
Template Known Secondary structure							S		.	.	.	.	.	.		T	T
Template Predicted Secondary structure									.	.	.	.	.	.
Template SS confidence
		296	.	.	.	300	.	.							.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions